Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0151 |
Symbol | |
ID | 5708761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 178098 |
End bp | 178979 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641274654 |
Product | alpha-L-glutamate ligase |
Protein accession | YP_001539991 |
Protein GI | 159040739 |
COG category | [H] Coenzyme transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.751724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGTGG TGGCGGATGC ACCTATACCG AGTAGGAGTA ATAGGGACCT CTACTACAGT ATTAGGGCTA AGGGGCATGT GGCTAAGTAT ATTTCAATCT CACGATTATC AATAAAGCTT GATGGAAGTG ATGTCAGTGT AGTTGTTGGT GATAATAAGG TGGCTATTGA TGGGGTCTTC CTAAGAAGCA TAGGCTTCCT AATAGATGTT GAGCAATTCT TCCACAGGGT TAGTGTATTG AGGACCCTTG AGGACTCTGG TACAGTACTG GTAAATACTG TTGATGGCTT ATTAAGGACC AGGAACAAGA TAGAGACCCT TGCCCTATTA GCCAAGAACA AGATACCAGT GCCCTCAACA GTCTCCACTG AAAGCCTACT AACGGCCTAC ACTGCGGCTA AGAGCATGGG TCAGGTTGTT ATTAAGCCTG TTCAAGGCTC CAGGGGTTTT GGCTCAGTCA TGATCACTGA CCCTGATATA GCCTTCCAAG TGGCTAAGTC ACTTCTCGTG GTTAAGAAAC CAATATATGT TCAGAAGTAC ATTAAGAAGC CTAACAGGGA TATTAGAGTC ATGGTTATTG ATGGTGAAGT CTTCGGATGC ATGCTTAGGG TTGCAACTGA TGGTCAGTGG AAAACCAACA TTGCCCAGGG GGCTTACGGT AAGCCATGTG ATAAGATTGA TGAGGAGCTT AAGGAATTAT CCATTAAATC CACTGAGGTA CTTGGATTAA CGTACGCTGG TGTTGATGTT GGGGAGGGGC CTGATGGGTA CGTGATTTTT GAGGTTAACG GTAGTCCTGA TTGGCAGGAG TTAGCGTCAG TAACCATGAA TAACCCAGCC CCTAGGCTAG TTGAGGTAAT GGAGAGAATA ATCAGGAAGT AG
|
Protein sequence | MAVVADAPIP SRSNRDLYYS IRAKGHVAKY ISISRLSIKL DGSDVSVVVG DNKVAIDGVF LRSIGFLIDV EQFFHRVSVL RTLEDSGTVL VNTVDGLLRT RNKIETLALL AKNKIPVPST VSTESLLTAY TAAKSMGQVV IKPVQGSRGF GSVMITDPDI AFQVAKSLLV VKKPIYVQKY IKKPNRDIRV MVIDGEVFGC MLRVATDGQW KTNIAQGAYG KPCDKIDEEL KELSIKSTEV LGLTYAGVDV GEGPDGYVIF EVNGSPDWQE LASVTMNNPA PRLVEVMERI IRK
|
| |