| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0145 |
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| Symbol | |
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| ID | 5709256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 172231 |
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| End bp | 173583 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641274648 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001539985 |
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| Protein GI | 159040733 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.570332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTGATT GCGACTTAAT AGATATGGCG TTCGTGGACT CTAACGCTAG ACGTAAGATT
ATACAATACA TGCTTGATAA GGGCATTGAT CCACAGGACC TGGGTTTCTC AAGGGAGTAC
ATTGAATCAG TGTTGAGGGG TAATGCTGAG GTGAATAACA TGCTTCTATG CGCTGCCTTA
AGATTCATGG ATCTTGATGA GTTGAACCGA GTAATAGGCT ATGTACCGAG GATGGCCACT
GAGGATGATT TAATAATGGT GATTAGTAGG GCTAAGAGGG ATGAGGCCTA CAGGAGGCTA
TTACTTGAAG CTGTTAATAG GGCGTTTAGG GAGGAGCAGG CTAAGGGTAG TGAGGTCACT
GTTAGTGGGT TGGGTTACGT TAAGTATAAG CTACCTGACC TCGCCTTAAC CATAGCTAAG
CTTGAGAGGA AACTCCCTGA AAGAACCATT GGAGCGATTC TTTGGTCCAT TAAGACAATC
CTAATGCTAT TCGCTGAATT AGTCTTCGCA CTAGCCATAG CCTTCTTCAT AATACACGCA
GTGCCTGGTG CAGGTCACCT AGTGGATCCT GTTAATAGTT TTCTAAGATT CCTACTAATG
GTTCTCCACG GTAACTTAGG TTGGTCAAGG ACCTATGGGG CTCCTGTGGC TGAGATAATA
GCCCTTGCCG CCCCCTGGAC CATAACCATA GCAACCATAT CCCTAACCCT AGCCTTCATA
ACAGGCTACA CACTCGGCTT AGTCAGCGCC TCTAGGACTG GTATCATTGA CTCATTTATT
AATGGTTTAG CCGCCTTCGC TCAATCAGTT CCATCATACG TAATAGCGTT AACCCTCATA
GTTGTCTTTG GGGTGGTGCT TAAGATACTG CCAATAGCTG GTATTAATTC CATGGGGATT
AAGCCTGGGG TAAGCATATT CTATTTCATT GATGTTGCTA AGCATTTAAT TTTACCAATA
TTCTCATACT ACATAATACT GTTTCCGAAT TGGGTCTTCA TTACGAGGAG CTTAGCGACA
ATGACCCTTA CTGAGGATTA TGTTTTAACA GCTAAGGCTA GGGGGTTACG TGAAAGGAGA
ATACTTAACT CTTATATTGG TAAAAATTCA ATACTGCCTC AGTTAACCTT ACTGGCTTAC
TCCTATGGCT TACTCTTCGG TAATAGTGTA TTTATTGAAA CAATGTTCGC AATACCTGGA
TTAGGCTACT TAATTAGTGT GACTGCAGGT ACCTCAGACT ACATGACTAC CGTGGGAGCC
TTCATGGTTA TAATAATATC CGTGATCATA GGTAACTTCA TAGCTGATTT AACGTATGGA
CTAGTGGACC CAAGGATAAG GGGGGTTGTT TAA
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| Protein sequence | MVDCDLIDMA FVDSNARRKI IQYMLDKGID PQDLGFSREY IESVLRGNAE VNNMLLCAAL
RFMDLDELNR VIGYVPRMAT EDDLIMVISR AKRDEAYRRL LLEAVNRAFR EEQAKGSEVT
VSGLGYVKYK LPDLALTIAK LERKLPERTI GAILWSIKTI LMLFAELVFA LAIAFFIIHA
VPGAGHLVDP VNSFLRFLLM VLHGNLGWSR TYGAPVAEII ALAAPWTITI ATISLTLAFI
TGYTLGLVSA SRTGIIDSFI NGLAAFAQSV PSYVIALTLI VVFGVVLKIL PIAGINSMGI
KPGVSIFYFI DVAKHLILPI FSYYIILFPN WVFITRSLAT MTLTEDYVLT AKARGLRERR
ILNSYIGKNS ILPQLTLLAY SYGLLFGNSV FIETMFAIPG LGYLISVTAG TSDYMTTVGA
FMVIIISVII GNFIADLTYG LVDPRIRGVV
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