Gene Cmaq_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0127 
Symbol 
ID5709290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp151132 
End bp152331 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content47% 
IMG OID641274630 
Productaminotransferase class I and II 
Protein accessionYP_001539968 
Protein GI159040716 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATCT CTACAAGATC CTCAATGTTC CCGGGATCTA AGATAAGGGC TATTAATGAG 
GAGGTAGTTA GGCTTTCAAG CCGTGGTATT AAGATTTATG AGTTCCATAT AGGGCAGCCG
GGTTTACCAC CAAGTAAGGA CTTGCTTCTT GAGTTTACCA AGGAATTACT TGAGAAACCC
TTTGAGCTAA GCATGTACAC GCCCAGTAGC GGCATTGATG AGTTGAGGGT CATGATTGCC
AATGACTATA GTAAGTACTC TGGGGTCAAT GTTACGCCCA GCGATGTATC TGTCACGGCA
GGGTCCGCAG AGGCACTACT TGCATTGTTC ATGGCCGTAA TAGATGAGGG TGATGAGGTT
GTCCTCACGG ACCCCACGTA CTTAATGTAC GAACCTGTAA TTAGATTTCT TGGTGGCAAG
GTTATTAAAG TAAGGGCCAG GGAGGAGCTG GGCTGGTTAC CCAGTGAGGA TGATTTGAGG
AGTGCCGTGG GCAGGAAAAC TAAAGCCATA ATCCTGGTTA ATCCAGACAA TCCCACGGGT
AGGGTACTTG GTGAAAAGAT CATTAAATTG GCTGTGGACT TGGCGAAGGA CTATGATGCC
TATGTGATCT ACGATGAGGC ATATAAGCAT CTTTACTACG AGGGAAACCA TACATATGCC
CTTGGGCTTG ATATGGAGCA TGTGATTGCC GTAAATACCT TCTCCAAGGA CCCCGCAATG
CCTGGTTGGA GGCTCGGCTA CGTGGTTACT CATGAGGAGT TTATCAAGGT TTTTAATAGG
GTTAAGCAGT ACACGAATCT AAACCCACCA ACACCATCCC AGTACGCAGG GCTACTTTAC
TTAACTAAGT ACAAGGAGAG GTACCTAAGT GAGACCCTGC CCATTTACAG GTCAAGGATG
GAGACCATGT ACAAAGCCAT TAGGGAATAC TTGCCCAAGG CCGCTGTGGT CAAGCCCAGG
GCTGGCTTAT TCATGTTCGT GAACCTTAAG CCATACCTGG AGAAACTTGG CATTGATGAT
GAGGAATTCT CCTTGAAATT AATAAGGGAT GCCCACGTAG CCGTGGTCCC AGGCTCTGCC
TTTGGCGATA ACGGTAAGTA CCATGTGAGG ATGAACTTCG CTAGGGAGGA TGAGAATAAC
ATTGTTGAGG GAGTTAAGAG GATAAGTGAG TATTTAGAGG GAAAACTAAG TAATCCATAA
 
Protein sequence
MRISTRSSMF PGSKIRAINE EVVRLSSRGI KIYEFHIGQP GLPPSKDLLL EFTKELLEKP 
FELSMYTPSS GIDELRVMIA NDYSKYSGVN VTPSDVSVTA GSAEALLALF MAVIDEGDEV
VLTDPTYLMY EPVIRFLGGK VIKVRAREEL GWLPSEDDLR SAVGRKTKAI ILVNPDNPTG
RVLGEKIIKL AVDLAKDYDA YVIYDEAYKH LYYEGNHTYA LGLDMEHVIA VNTFSKDPAM
PGWRLGYVVT HEEFIKVFNR VKQYTNLNPP TPSQYAGLLY LTKYKERYLS ETLPIYRSRM
ETMYKAIREY LPKAAVVKPR AGLFMFVNLK PYLEKLGIDD EEFSLKLIRD AHVAVVPGSA
FGDNGKYHVR MNFAREDENN IVEGVKRISE YLEGKLSNP