| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0116 |
|---|
| Symbol | |
|---|
| ID | 5709023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 140661 |
|---|
| End bp | 142022 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641274621 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_001539959 |
|---|
| Protein GI | 159040707 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGATT TTGAATATAT CGAGGAATTC ATAGTAAACA GAATGAGGGA GACCAGGATC
CCAGGACTTA GCGTGGGCAT AGTCAAGGAA AATGAATTAA TTTACGCAAG AGGCTTTGGG
TTCAGGAACT TGGAAAGAGG ACTGCCGGCA ACCCCCGGTA CTATTTATGG TATCGGATCA
GTAACTAAGA GCTTTACCGC ATTGTCTATA CTGAGGCTTG CCGAGGAGGG TAGGTTGAGT
CTTGAGGATC CCGTGGATAA GTACATACAA CTTAAGCTTA GGATCTCTGG AGAACCAGTC
AAGATACATC ACTTATTAAC ACACACCAGT GGAATACCCG CACTGGGTTA TGCCGAGGCC
TTCATAAACG GGGCCCTGGG GTTAGACAGT AACTGGTTAC CGGTATCGTC GGCGGATGAC
GTCATGGTAT TCATGAGGGG CTATGAGGAC TGGGTTGTAT CAAGGCCAGG TGAGAGGTTC
TTTTACCTTA ATGAAGGCTA CGTACTCCTG GGCCACGTGG TGAGTAAAGT TAGCGGTATC
CCTTACGAGA CCTATGTTAC GCAGCACATA CTCAAGCCCC TTGGGATGAA CAGAACATAC
TTCAACGCAG AGGAAGTCTC CAGGGACTCC GACGTGGCTA CACCGTACAT ACTGGATAGG
AAGGGTAGGC ATATACCCAG TAGGTTCCCC TTCGGGATAA CGGCAGATGG TGGGTTGTTA
AGCAACGTCA TTGACATGTC TAGATACATC ACAATGCTCA TGAATAGAGG TGTGCTTAAT
GATGTGAGGA TAGTGAGTAA GGATTACCTG GAACTTGCAG AGAGGAGGTA CATCAACGTG
CCCTGGAGGA TAATTGGTGA TGAGGGTTAT GGCTATGGGT TGATAGTTAG TGAGAACTTC
TTTGGTAGAA AGCTCGTGCA GCATAGTGGG AATGTCCTTG TTTACACAGC GTACATGGCC
TACCTACCCA GTGATAGGTT AGGTGTGGTA ATCATGAGTA ACGCCGAGGG GTACTCCATG
ATGAAAATGG GCATTTACAT ATTAACAAGG CTCGTGGGCC ACGAGCCCAG GGAACTATGG
GCATTTAAAC TAGAGGATAC GTTGAGGAGA CTGGAGGGTG TTTATGAAGC GTATAACGGT
ACCGTGAGGG TTTCCGTGAA GGCACGGGGT GACTTCCTAG TGATTAAAAG CTCCACGAGG
TACACCGAGG AATCAACAAT ACTAATCCCA GAGGAGGTGA GCGGTGACTA TGCACGATTC
TACACATTAC TTTACGGAGC CAAGGTACCC GTGGAGTTCA CTATAAAGGG AGGTAAAATA
TACATGACGT ATGAAAGATA CGTATTCATA AAGAGAGAGT AA
|
|---|
| Protein sequence | MVDFEYIEEF IVNRMRETRI PGLSVGIVKE NELIYARGFG FRNLERGLPA TPGTIYGIGS
VTKSFTALSI LRLAEEGRLS LEDPVDKYIQ LKLRISGEPV KIHHLLTHTS GIPALGYAEA
FINGALGLDS NWLPVSSADD VMVFMRGYED WVVSRPGERF FYLNEGYVLL GHVVSKVSGI
PYETYVTQHI LKPLGMNRTY FNAEEVSRDS DVATPYILDR KGRHIPSRFP FGITADGGLL
SNVIDMSRYI TMLMNRGVLN DVRIVSKDYL ELAERRYINV PWRIIGDEGY GYGLIVSENF
FGRKLVQHSG NVLVYTAYMA YLPSDRLGVV IMSNAEGYSM MKMGIYILTR LVGHEPRELW
AFKLEDTLRR LEGVYEAYNG TVRVSVKARG DFLVIKSSTR YTEESTILIP EEVSGDYARF
YTLLYGAKVP VEFTIKGGKI YMTYERYVFI KRE
|
|---|
| |