| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0112 |
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| Symbol | |
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| ID | 5709051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 137375 |
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| End bp | 137923 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641274618 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001539956 |
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| Protein GI | 159040704 |
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| COG category | [K] Transcription |
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| COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
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| TIGRFAM ID | [TIGR00270] conserved hypothetical protein TIGR00270 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.1301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTAGTTA CGTGTGACAT ATGTGGGAGG GAAATAAACG GTGAACCCAT AGTTGTTGAA
ATAGATGGAG CCGTATTAAC GCTATGTCAA CGCTGCGCCT CCCGTTACGC TAACGTTAAG
GGTGTTAGGG TGGTTTCAGG CGTTATTCAA CAAACCCCAA GTGGTCAAAC GACGATTAAG
CCAAGGCAGA GGTACATAAC CCCCGTTAGG CAGGTTAAGA GACGTAATGA GGTTAATGTT
AATCAAGCGG AGAGGCTTGA GGTTATTGAT AATTACGGTG AGGTGATTAA GGATGCTAGA
AGCAGGTTAG GTATGAGTAG GGACGTATTA GCAAGCATGC TTGGTATAAA GGAGAGCACG
CTTAGGAATA TTGAGGATGG TAAACTAATC CCCGATATTA ACCTAGCCAG GAAAATGGAG
AAGGTCCTGG GGATTAAGCT ACTTGTTGAG AGGGAGGAGG CTGAAATGGA GTTTGGTGAA
TCAGGGGGCG GTGAGGTAAC GTTAGGTGAT GTGGTTGAGA TTAGGAGGAA GGATAAGGAG
GGGCAGTAG
|
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| Protein sequence | MVVTCDICGR EINGEPIVVE IDGAVLTLCQ RCASRYANVK GVRVVSGVIQ QTPSGQTTIK
PRQRYITPVR QVKRRNEVNV NQAERLEVID NYGEVIKDAR SRLGMSRDVL ASMLGIKEST
LRNIEDGKLI PDINLARKME KVLGIKLLVE REEAEMEFGE SGGGEVTLGD VVEIRRKDKE
GQ
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