| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0097 |
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| Symbol | rps10p |
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| ID | 5710033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 115659 |
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| End bp | 116024 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641274600 |
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| Product | 30S ribosomal protein S10P |
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| Protein accession | YP_001539941 |
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| Protein GI | 159040689 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01046] ribosomal protein S10(archaeal)/S20(eukaryotic) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.718504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCATGTC TTAGTGTTCA GAAATGTTTT AAAGGGGTTT CCTATCAGTG GCCTGTGCCT
AGGATTGTGA GAATTAGGAT TTGGGGGACT AACACTGATT CGGTTGATGG ATTAGCTAGG
GATATTACTG GGATAGCTAA GAAGCTTGGG ATTAAAGTTA GGGGACCAAT ACCATTACCC
ACTAGGCGGC TTATGGTAAC TGTGAGGAGG GCTCCAAGTG GTCAAGGTTA CCATACTTAT
GATCATTGGG AAATGAGGAT ACATAAGAGG GTTGTGGACA TGGATGCTGA TGAGAGGGCC
CTTAGGCAGT TAATGAGGCT TAGAATACCT GAGGATGTTA AGGTTGAGAT TGAGTTAATA
GGTTAA
|
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| Protein sequence | MSCLSVQKCF KGVSYQWPVP RIVRIRIWGT NTDSVDGLAR DITGIAKKLG IKVRGPIPLP
TRRLMVTVRR APSGQGYHTY DHWEMRIHKR VVDMDADERA LRQLMRLRIP EDVKVEIELI
G
|
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