| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0090 |
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| Symbol | |
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| ID | 5710300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 107368 |
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| End bp | 109182 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641274593 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001539934 |
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| Protein GI | 159040682 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01577] oligosaccharide amylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.33989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAGA CGGTTTATGA GCAGAGTATT GTAGGTAATG ATAGTATGCT TGCTGTTATT
GGCGGTAGAG GGGAGTTAAG GTACTTGTTT TACCCAACGA AGTCATTTCC ACAGAACATT
CACTCCTCAT TACCTGGAAT ATATAGGAGG GGCTACTTCA GTTGGTTAAC GGATTGGAGT
GATATTAAAC AGAGGTATGC TGCCCCAGGG ATCTTGGAGA CCGTGTTCAA GAGTGGGGAT
GCTTCGGTTA AGGTAATGGA CTTCGTACTC CATAGTGAAA GTGTACTTAT TAGGAGGTTT
GAATTCAGTA TACCGGGTGA ATTCAGCTTC ATATACTATA CTTCACCTCA ATTATGGGAA
ACCCACAATG CTGATGCAGC TTACTTTGAT GAGAGGTATG GCGCCATAGT AGACTATAAG
AGGGGACTCA CCCTAGTGGT CTCAGGTGAT AGGATACCTA ATGAGTATCA GATTGGTCAA
TTAGGCGCCG ACTCAGATGC GTTCACTGAC GCCTACGATG GTAGACTCAA CATGAATAAA
CTAAGCATAT ATGAGGGCTT CAGGGGAGTT AACTTCGCAT TACTGTGGAG GCTTAGGGAT
AATGAGACAT TAACCATTTA CTTTATCCTA GATAAGAGCG AGGAGGCTGC ATTAAGGGAA
TTAGCCAAGA TTAAATCAAT GGATTGCTAC ATCTTAAGCC ATAGCGTTGC TGAGCATTGG
GAGGGTTGGA TTAATAAGAT TAAGTTAAAT GGAGTTATTA GTGAGGAAAT GATTAAGCAC
TCAGCGTACG TAATTAAGAT GCTTCAAGAC TCAGAGGGAG CTTTCATAGC GGCACCAACA
TTATGGCCTG ATTACAGGTA TTGCTGGCCC AGGGATGCGG CTTACTCAGC TATGGCGTTG
GATATTCTTG GTTACCATGA TGAAGCCTTT AAATTCATTA ATTGGGTGGT TAAGTCACAG
GGGGAGAACG GGGCCTTCTA CCAAAGGTAC TACGCTGAGC CTGGACTTAA GGCGCCATCA
TGGTCCTTTC AAATAGATGA AACAGCCTCA GTGGTGCTTG CAACCTACGT TCACTTTAAG
TTAACTCTAG ATAGGCAGTT TCTAAAGAAT GCGTGGGTAA TGGTTAGGAA GGCTGCTGAG
TATTTGGCGG CTAACGTAAG TGATGATGGT TTAACAACAC CCACCGTTGG GCCCTGGGAG
GAGCACTTAG GTGTTCATAC TTACACCAAT GCCTCAGTGT ACGCCGCTTT ATCATCGGCA
TCATACTTAG CCGGTGAAAT AGGTGATAGA AATAGGGCTG TGGAGTGGGG TAGGTATGCT
TCAGTTATTC GTTCAACTAC ACTTAATCAG GCATGGAATG GTAGTTTCTT CATCAAAATA
ATTAAACCAA GATTCAATAT ACCCGATTCA GCAACGCTTG GCTTAGTTTT CCCATTCAAT
ATGGTTAACG TGAATGATGA CAGGGTGAAG ATGAATGCTG AAACCATTGA GAAGACGTTT
AAGTATAAGG TTGGTGGCGT GGGCAGGAAT CCTGAGGATA AGTACTACGG TGGTAACCCA
TGGATAATAA CAACCCTTTG GCTTGCAATA TACCATAAAC TGGCTGGTAA TGTTGATAAG
GCCAATGAAT TAATAAAATG GGCTTTAACC CACAGTACTA GTACTGGTAT GCTCCCTGAG
CAGGTTGATA AGGATTCAGG AAGACCCATC TCTGCAATAC CCCTGGCTTG GTCGCATGCA
ATGTACATAA TGGCTGAGGT AATCAATAAT GATTTATTCA ACAAAATAAC GCCACCACTC
ATTAGCAATA AGTGA
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| Protein sequence | MTETVYEQSI VGNDSMLAVI GGRGELRYLF YPTKSFPQNI HSSLPGIYRR GYFSWLTDWS
DIKQRYAAPG ILETVFKSGD ASVKVMDFVL HSESVLIRRF EFSIPGEFSF IYYTSPQLWE
THNADAAYFD ERYGAIVDYK RGLTLVVSGD RIPNEYQIGQ LGADSDAFTD AYDGRLNMNK
LSIYEGFRGV NFALLWRLRD NETLTIYFIL DKSEEAALRE LAKIKSMDCY ILSHSVAEHW
EGWINKIKLN GVISEEMIKH SAYVIKMLQD SEGAFIAAPT LWPDYRYCWP RDAAYSAMAL
DILGYHDEAF KFINWVVKSQ GENGAFYQRY YAEPGLKAPS WSFQIDETAS VVLATYVHFK
LTLDRQFLKN AWVMVRKAAE YLAANVSDDG LTTPTVGPWE EHLGVHTYTN ASVYAALSSA
SYLAGEIGDR NRAVEWGRYA SVIRSTTLNQ AWNGSFFIKI IKPRFNIPDS ATLGLVFPFN
MVNVNDDRVK MNAETIEKTF KYKVGGVGRN PEDKYYGGNP WIITTLWLAI YHKLAGNVDK
ANELIKWALT HSTSTGMLPE QVDKDSGRPI SAIPLAWSHA MYIMAEVINN DLFNKITPPL
ISNK
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