Gene Cmaq_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0068 
Symbol 
ID5708986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp82152 
End bp83516 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content42% 
IMG OID641274571 
Producthypothetical protein 
Protein accessionYP_001539912 
Protein GI159040660 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1030] Membrane-bound serine protease (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTTAA AATTAAGTAA AGGTGTAGGT GAAGTGAAGG CACTATTACT TGCATTAATT 
ATACTCACCT TAGCATTACC CATGATTGTT CATGCAGCAT CCAGCGGCAT TATTAAGGTA
ACCCAGGTCT ACACTTATAA TTTGAATGGA GAGATAACTG ATAATACTTA TGACGAATTA
AAGAGCGTTA TTAATCAACT CCCACCTGGT AGTGTATTAG TCATATACAT GGAAACACCA
GGTGGCTTGC TTGATGCAGC CTTAAACATA GTTAGTCTCT TTGAAACATC AAGTGTAGTG
ACTGTTGGAT TCGTTTACCC AGTGGGCTCA TATGCCTGGT CAGGGGGCAC GTTAGTCCTC
CTCTCAACTA CAATAGCCGC CATGGCTCCA GGAACCGTAA TTGGTTCATG TCAACCAGTG
GAGATCAATG AGGTTACTGG GCAGGAGGTT TTCATAACTG AGCCTAAGAT ACTTAATGCA
GTGGCTAAGT ACTTCGTTGA GGCCGCTGAG TTCAGGGGTA GGAACACTAC CTTCGCAGCA
TCCTGCGTAT ACAATGACAC TAATCTAGGG CCTGAGGAGG CGCTTAGGTA TGGTGTTATT
AATTATGTTG CAAGTGATAT TAATCAGTTA TTATCCATGA TGAATGGTAC CACTGTTAAC
GTTAATGGAG TTAACTACAC GTTAATAATG GAGAACCCGA CTATAACTCA ATTAACGCCA
CCCATCAGTT ACCAACTTTA CGATGCTTTA CAAAACTCAG TGATTGAGAA TATCCTCTCC
ATACTGGGTG TATTGCTTAT CCTGGCAGGT TTAATAACCG CCCACGTATA CTTAGCTGGC
ATAGGTGCAG CATTACTAGT TGTATTAGCC TTACTTGGCT TACCAATAAA CTACGCTGGC
TTAGGCTTAA TGGTGACTGG TGCCTTATTA ATGGCCCTTG AGTGGCATAG TGGGGGTAAG
TTACATGGTG TATTAATAGC CGTTGGTGCG GTGCTTATTG CAGTGGGTTT AATACTACTC
ATACCAAATG TCACGCCACC CCAGTATGCA CTTAAATATA ACCCAACAAC ACTTAGAATA
ATACTTTACA GTGAAATAGT AGGGATTGGA GGCTTATCAG CCTGGATAGT AATGCTAATA
GTTAGGGCTG TTAGGGCTAA GCCAATATCA ACAGTAATAT ATTACCCAGT AACAGGGTTA
ATTGGAGTAG CTACTGAGGA TATTAAGGCT GGGCAAATGG GCATTGTTAA GATTAGGGGA
GAGTACTGGA AGGCAATAGC ACTGGAGGAT GTTAAGGAGG GTGATAGGGT TACTGTGGTA
TCGTATGAGA ATAATATTAT AAAGGTGAAG AAGGCTAATC AATAG
 
Protein sequence
MYLKLSKGVG EVKALLLALI ILTLALPMIV HAASSGIIKV TQVYTYNLNG EITDNTYDEL 
KSVINQLPPG SVLVIYMETP GGLLDAALNI VSLFETSSVV TVGFVYPVGS YAWSGGTLVL
LSTTIAAMAP GTVIGSCQPV EINEVTGQEV FITEPKILNA VAKYFVEAAE FRGRNTTFAA
SCVYNDTNLG PEEALRYGVI NYVASDINQL LSMMNGTTVN VNGVNYTLIM ENPTITQLTP
PISYQLYDAL QNSVIENILS ILGVLLILAG LITAHVYLAG IGAALLVVLA LLGLPINYAG
LGLMVTGALL MALEWHSGGK LHGVLIAVGA VLIAVGLILL IPNVTPPQYA LKYNPTTLRI
ILYSEIVGIG GLSAWIVMLI VRAVRAKPIS TVIYYPVTGL IGVATEDIKA GQMGIVKIRG
EYWKAIALED VKEGDRVTVV SYENNIIKVK KANQ