Gene Cmaq_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0053 
Symbol 
ID5708809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp69097 
End bp70113 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content40% 
IMG OID641274556 
Producthypothetical protein 
Protein accessionYP_001539897 
Protein GI159040645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.448801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCAGT ACATTTACAT TACAGTAATG GTAATAGCCC TAGCAGTGGC CGTATTCTTC 
GTGTACATGT ACCTTACCAT GAAGGCTACC TTAGGTACGG TTAATTCAAG GTATAGTAAC
TTACTTGAAT CCTTAACTAA TCTTCAACTT ATTAATAATA AGTACGGGCA ATTACCCATG
ATTAATGTCT CTGCAATTTA CGCCACTGAA GATGGATACG CTATAGTGTT TACGATAAGT
AACCCTGAGA ATTATACGCA ATTCCTATAT GACTTAGATA TAACAATGCT ACCTTACTCT
GCCCGTACAT ATTACGTGGG TACTGTATCA ATACCACCCT TAAGCACCAT AACATACCCA
GTGTTCGTTT ACTTCAATAG CACCATATTA GCAGTAAGCA CTATATATAA TTTCAATCAG
GTGGCTGGTG GTTCAGAGAC CATTAGAAGC ACTGTTATAG GACCTGTGTA CTATGCATTA
AGTACCTTAC CTGGCTCCAC AATAACCCTA AGCTACACCC TGGTTAATGG ATCAACGCGC
ACTTACTCAT ACATAGTCAC TAATTTCACC ACGCTTCAAA ACTCCATTTA CGCCTATGCC
GCAGCCAGTG ATTCATGGCC ATCTGAAGTG CTTTTAACCT ACCTGGCTCC ATTACCCTTC
TCTGTAATTG GTTATAGGCT TATTGCACCC AATGGAACAG TATTACTAAC ATGTACCTCA
ATTTCGAAAA CAGCCTTCCC TAATGGAACC AGTGTCAACT ATATTCCCAC CCCCATTGGT
CAATTATACC TACCCCTCTA TAATGCATCA GCAGTAACTA CAATACATTA CTGGCTAAGC
GGCTACTGGG ATACATTTGC TTACAATGTC ACAGCCGCAT GCATGGGTTC CTTCATACTA
TTCTCAATGC CCCTTATTCA TTACCAACTA CAAGTAACCT ACATTATCAA TGGAACACAG
GAAACTGCGG TAATTCCAAT AACATACACG ACTACATCAA TGTTAATTTG GAGTTGA
 
Protein sequence
MRQYIYITVM VIALAVAVFF VYMYLTMKAT LGTVNSRYSN LLESLTNLQL INNKYGQLPM 
INVSAIYATE DGYAIVFTIS NPENYTQFLY DLDITMLPYS ARTYYVGTVS IPPLSTITYP
VFVYFNSTIL AVSTIYNFNQ VAGGSETIRS TVIGPVYYAL STLPGSTITL SYTLVNGSTR
TYSYIVTNFT TLQNSIYAYA AASDSWPSEV LLTYLAPLPF SVIGYRLIAP NGTVLLTCTS
ISKTAFPNGT SVNYIPTPIG QLYLPLYNAS AVTTIHYWLS GYWDTFAYNV TAACMGSFIL
FSMPLIHYQL QVTYIINGTQ ETAVIPITYT TTSMLIWS