| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0033 |
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| Symbol | |
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| ID | 5708893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 47839 |
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| End bp | 50184 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641274536 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001539877 |
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| Protein GI | 159040625 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.649183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTATA TAAGTAAATC AACAATACTA ATATCAGTAA TGGTATTAGC CATCATTACG
ATTATTGCAC TACCCCAACA AACTCAGAAG CCTCAAATAA TATGGGCTGA TTACGGTACA
ATAACCACAC TAACCGGCCC AATCTATAAT CCATTTTACC CAAATACATT AGCCACAGAT
ACAGTAACCA GTATAATATC CTATGCGCCA CTGGCGTTAT ATAATCCATT CAATAATGTA
TTTTACCCGG TCTTAGCCAG TAACTGGACT ATTCAAGTTC TCCCTAATGG TAGTGGTATT
TTAACTGTTT ACCTTAGGAA GGGGCTGTAT TGGTTTAATG GTTCAGCTAC AATGCTCTTC
ACTGCATGGG ATGTTTACGC ATACTTCTAC ATTGAGGATA AGGCCTTTGA GGCATATGCC
CCATTCATGC AGCCACAATA CGCTGATGAG AGTATAAGGG TACTTGATAA TTATACTATT
CAATTCCTAT TCCAAATATG GAGCCCAACC GAGTGGATAT ACTTCATTAC CTCAAGCATT
GCGACTCCTT GGCCTGTTTG GAAACCCATT GTTAATGAGT TGAAGACTAT GAATGCCTCC
CAAGCCTTAG CCTTCTCAAC CAATGTAACT AGGTACGTGG TGCCTTACTG GGGTATTTTC
CCATATTACT TAACCTACAT AAGTTCATCA AGCATAGAAC TAACCCTGGA GCCAAGCCCA
TTGCTCAACC AGTGGTATAC CGTATTTCCG CTTGCAGACT GGAATTACTA TGACCCAACC
TTCGAGGAAT TCTTTACTGG GAGCCAGTAC ATAGCATCAC TGGTGTCGCA TAAGGCCACT
TGGGCTGGCG GCGCGGCAGG CATTAAGCAG GTAGCCTTAC TTAATAGCAG TGGCTTCAGT
GCATACTTCG CCCCAGACTT ATCAGGCTGG GGAATCACGT TCAATCCACA TGTGTATCCA
TTCAACATAA CGCTGATTAG GGAGGCCCTA TGCCTCATAT TTAATAGAAC AGCCGTTGTA
GCTGCCTGGG GACTTAACTA CCCTAACTAC TACTCTCAGC CAATAGCCCC TGAAACTATT
AGTTCTTATC CGCCAAGTGT TAGGCAGTTC ATTATACCGT GCTCCTATGA TCCAGCTAAG
GCGGCTCAAA TGCTGCAGAG CCTAGGATTC AAGAAGATTA ACGGATACTG GTATTTGCCT
AATGGCTCCA TGTTCTCAAT ATACGTACTG GCACCCAGTG GTTGGATTGA TTGGGATACC
ATGGCTTCTG AGGCTATTGA GGAGATGCAG GCATTCGGCA TAAACGCTAA GTTAATCACA
ATGGATGCTG GAGCCTACTG GGGTACCATG ATACCTGATG GTGATTACGT CGCTGCATTA
ACATGGACCA CCGCATTCAC TCCAGCCTAC TATAGTGCGT GGGAGGCGTT GAGTAATCCA
TGGTGGGCCT TCGGTAGTGC AATATCTGCT TATACTCCTG GTAGTGAGGT TTGGCCATTC
CAGTGGCCTA ATGGGACATG CACACCAGTC ACTGCACCAG CATCATTGAA ACTACCCAAT
GGCACAATAG TATGGTGCAT CAACTCAACA TACGGCTACA TAAACCTAAG CAACTGGCAA
ACATTCTTCA ATGATGCAAC TCCAGGAACA GCGGACTACA ATCTAGCACT AGACACAATA
TTCGCATGGT ATAGTTACTT CACTCCAATA GTGCCGTTAG CAGCCAAGAT AGACCCATTC
ACGTACTTAA CACCAATAGC TGATCCGAAT TGGCTATACC TCTGTCTACC TAATGAGACA
ACGTGGTTCC TTGTATCTGC AAACTGGTAC ACCTACGGCT CATTAATAAT GCTAATGTTT
GGTGCTGTTG CACCAAGAGG CGTAGTACCA CCATTAGCCC AGGTAATTGC TAACGGTAGC
CTTTGGGTAA AATACCCACA AATAGCAAAT CTACTTGCCT TACCTAGTCC TGATCCTTCG
TTGCAGGCTT GTGTGGCATC GTACTTCCAT ATACCGTATA CTCCGGTGAC TACTTCAACC
TCAACAACCA CGACTACATC AACAACTACT ACATCAACAA CCACAACCAC TACTACACCG
GTTACTACTA CGGCTACAAG CACTACTACG ACTACTTCAA CAGTAACCAC TACTGCCGTT
AGCACTGTTA CAAGTACTGT TACAACCACT GCTGTAAGCA CGGTTACAAG TACAGCAACC
ACTACGGCAG TAAGCACAGT AACAGTAACC AAACCAGTAG TATCAACAGC ATTAATAGCA
GGAATAATTA TTATTGTAAT CGTAATAGCA GCAGTAGCAG CAATAATAAC ATTAAGAAGA
AGATAA
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| Protein sequence | MRYISKSTIL ISVMVLAIIT IIALPQQTQK PQIIWADYGT ITTLTGPIYN PFYPNTLATD
TVTSIISYAP LALYNPFNNV FYPVLASNWT IQVLPNGSGI LTVYLRKGLY WFNGSATMLF
TAWDVYAYFY IEDKAFEAYA PFMQPQYADE SIRVLDNYTI QFLFQIWSPT EWIYFITSSI
ATPWPVWKPI VNELKTMNAS QALAFSTNVT RYVVPYWGIF PYYLTYISSS SIELTLEPSP
LLNQWYTVFP LADWNYYDPT FEEFFTGSQY IASLVSHKAT WAGGAAGIKQ VALLNSSGFS
AYFAPDLSGW GITFNPHVYP FNITLIREAL CLIFNRTAVV AAWGLNYPNY YSQPIAPETI
SSYPPSVRQF IIPCSYDPAK AAQMLQSLGF KKINGYWYLP NGSMFSIYVL APSGWIDWDT
MASEAIEEMQ AFGINAKLIT MDAGAYWGTM IPDGDYVAAL TWTTAFTPAY YSAWEALSNP
WWAFGSAISA YTPGSEVWPF QWPNGTCTPV TAPASLKLPN GTIVWCINST YGYINLSNWQ
TFFNDATPGT ADYNLALDTI FAWYSYFTPI VPLAAKIDPF TYLTPIADPN WLYLCLPNET
TWFLVSANWY TYGSLIMLMF GAVAPRGVVP PLAQVIANGS LWVKYPQIAN LLALPSPDPS
LQACVASYFH IPYTPVTTST STTTTTSTTT TSTTTTTTTP VTTTATSTTT TTSTVTTTAV
STVTSTVTTT AVSTVTSTAT TTAVSTVTVT KPVVSTALIA GIIIIVIVIA AVAAIITLRR
R
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