| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0027 |
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| Symbol | |
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| ID | 5710044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 39876 |
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| End bp | 41549 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641274530 |
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| Product | thermosome |
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| Protein accession | YP_001539871 |
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| Protein GI | 159040619 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.196401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAGC AGGCCTACAT TGCTCAGATA GGTGGAGTCC CTGTACTAGT ACTTAAGGAG
GGGACGCAGA GGGCCTTTGG TAAGGAGGCG CTTAGGATAA ACATAATGGT TGCTAAGGCG
GTATCAGAGG TAATGAGGAC TACACTGGGG CCTAAGGGCA TGGATAAGAT GCTTATTGAT
AGCCTCGGTG ACATAACTAT AACCAATGAT GGCGCAACAA TACTTAATGA AATGGATGTA
CAGCACCCAA TAGGTAAGCT GCTTGTTGAG ATAGCTAAGA CGCAGGATGA TGAGGTTGGT
GACGGTACAA CCACAGCAGT AGTATTAGCT GGGGCGCTGC TTGATGAGGC TGAGAAGTTG
ATTGAGAAGA ACATTCACCC AACCGTAATA ATATCAGGCT TTAAGAAGGG TCTTGACGCC
GCAATCCAGT ACTTAACCAA GATAGCTACC CCAGTGGATA GGGATAATAT TGATGTTCTT
AAGAAGGTTG CTGCAACCTC AATGCATGGT AAGATTAGTG AAACCGTTAA GGATCAATTC
GCTGAATTAG CGGCCAGGGC AGTATCAATG ATTAAGGAGC AGAGGGGTGA TAAGTGGATT
GCGGACTTGG ATAATGTTCA ATTAGTTAAG AAGCACGGCG GCAGTCTACT TGATACTCAA
CTCATTCAGG GTGTGGTTGT TGATAAGGAG GTTGTTCATG CCGCAATGCC TAAGAAGATC
ACTAACGCTA AGATAGCTCT ACTTGATGCG CCACTTGAGG TTGAGAAGCC TGAGATTGAT
GCAGAGATTA GGATCCAGGA CCCAACCCAA ATTAAGGCGT TCCTAGATGA GGAGGAGAAT
ATACTGAGGG GTTACGTTGA TAAGCTTAAG TCAATAGGCG CCAATGTAGT CTTCACAACC
AAGGGTATTG ATGACATAGC CCAATACTAC CTGGCTAAGG CCGGTATTAT GGCTGTTAGG
AGGGTTAAGA GGAGTGACAT TGAGAAGCTT GTTAGGGCAA CTGGAGGGAG ACTGGTAACT
AATATAGATG ATTTAACTGA GAATGACCTA GGCTTCGCTG GTCTTGTTGA GGAGAGGAGG
GTTGGGGATG AGAAGATGGT GTTCGTTGAA CAGTGCAGGA ACCCGAAGGC AGTGAGCATC
CTCATTAGGG GTGGGTTTGA GAGACTGGTT GATGAAGCTG AGAGGAATCT AACAGATGCC
TTAAGTGTAG TATCAGATGT AATAGAGAAC CCATTCATAG TACCAGGCGG TGGTGCACCT
GAGATTGAGG CAGCAAAGGC AGTTAGGCAG TTGGCGGCTA AGGTTAGTGG TAGGGAGCAG
TACGCAATTG AGGCCTTCGC TAACGCATTA GAGGCAGTGC CTAAGACACT TGCGGAGAAC
GCCGGCCTTG ATGCAGTAGA TATACTCACT GAGCTTAGGC ACATGCATGA GAGCAGGGAG
GATGGGTGGA AGTACGGTAT TGACGCCTTC AGCGGTAAGG TGGCTGACAT GGTTGCAATG
AACATTATTG AACCACTGGT TGTTAAGACC CAGGCCTATA AGGCTGCTGT GGAGGCTACA
TCAATGATCC TTAGGATTGA TGAGATAATT GCCGCAAGTA AGATTGAAAG CGGCGGTGAG
AAGGGTAAGA AGGAGGGGGA GGAGGGGGCT GGTTCATCAG GAAGCTTTGA GTAA
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| Protein sequence | MSQQAYIAQI GGVPVLVLKE GTQRAFGKEA LRINIMVAKA VSEVMRTTLG PKGMDKMLID
SLGDITITND GATILNEMDV QHPIGKLLVE IAKTQDDEVG DGTTTAVVLA GALLDEAEKL
IEKNIHPTVI ISGFKKGLDA AIQYLTKIAT PVDRDNIDVL KKVAATSMHG KISETVKDQF
AELAARAVSM IKEQRGDKWI ADLDNVQLVK KHGGSLLDTQ LIQGVVVDKE VVHAAMPKKI
TNAKIALLDA PLEVEKPEID AEIRIQDPTQ IKAFLDEEEN ILRGYVDKLK SIGANVVFTT
KGIDDIAQYY LAKAGIMAVR RVKRSDIEKL VRATGGRLVT NIDDLTENDL GFAGLVEERR
VGDEKMVFVE QCRNPKAVSI LIRGGFERLV DEAERNLTDA LSVVSDVIEN PFIVPGGGAP
EIEAAKAVRQ LAAKVSGREQ YAIEAFANAL EAVPKTLAEN AGLDAVDILT ELRHMHESRE
DGWKYGIDAF SGKVADMVAM NIIEPLVVKT QAYKAAVEAT SMILRIDEII AASKIESGGE
KGKKEGEEGA GSSGSFE
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