Gene Cmaq_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0020 
Symbol 
ID5710442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp33104 
End bp34516 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content43% 
IMG OID641274523 
Productadenylosuccinate lyase 
Protein accessionYP_001539864 
Protein GI159040612 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATAC TAAGCCCCCT TGATGCCAGG TATAGAAATG AATTAAAGGG TTACCATGAG 
GTAGCCTCAG AGGATGCCTT CATAATGTAC CGCGCCAAGG TTGAGTTACT TTACCTTGAA
TTCCTCATAG ATAAATTATC AAAACTAGGC CTAGTGAAAC CCATTAATGA TGAAGAGAAG
CGGAGGCTAA GGGGGATTAG GTTAAGTAGT GGTGATGTTA ATGAGGTTAG GAGACTTGAG
GATGAACTAG GGCATGATGT TAAGGCACTT GAGTACGTGT TGAGAGGCAG GTTAAAGGCC
ATTGGCCTTG AGGATTACGC CCACTTAATA CACTTAGGGT TAACCTCAGA GGATGTTAAT
AATTTAGCAA TGGGGATAAT GATTAAGAGA ATACTTTACG AATACTTGAT ACCAAGCCTA
GTGGATTTAG GTAAGGTACT CGTTAACTTA AGCAATAAGT ACGCTGACAC CCCCATGCTT
GCCAGGACCC ATGGTCAACC AGCCACACCA ACAACCTTCG GTAAGGAAAT AGCCTACCAC
TCCCATAGAT TATGCTCATG GATAAGCACC TTAATCAACC TTAAGATTAA TGGTAAGGTA
GCTGGGGCAA GTGGTTCAAT GGCTAGCTTC ACCATGATTG CTCAATTGGA TTGGCCTAGG
GAATTAATGA ACTTCGTATC ATCACTCGGC CTTGAACCCA CACCAGTGGC GACTCAAATC
CTCCCCCCAG ATAATTTAAA TCATATTATT GCAGCAGTGG GTTTAACATC ATATTCATTA
ATTAACCTGG CTCAAGACAT GTGGATGTAC TCAATGCTTG GTTACATTAA GTTTAAGGGA
AGGGTAATTG GGTCATCCAC AATGCCTCAT AAGGTTAATC CAGTAGACCT TGAGAATGCT
GAGGGTAATT TAAAGCTGGG GGCCTCAATG CTCATGGAGA TTTCTAAAAT CCTGCAATCA
AGCAGGTTAC AGAGGGATTT AAGTGATTCA ACGATTAAGA GGAATCTTGG GTTAGCCATG
GGTTACGTGG TGCTTGGATC AAGGAGACTT AGGAAGTTCA TGGAGGGTAT TGAGGTTAAT
GAGGAGGCCT TAACCAATGA TTTAAATAAT CATTGGGAAG TCTTAAGTGA GGCTGTTCAA
GTTAGGTTAA GGGTACTTGG CCAGGCTAAT GCCTATGAGA AGTCGCTGAA ACTCTTTAGA
GTGCCGAGAA TGAGCATGAG TGATTACATT AATGCGATTA AGGAGTTAGG CGTTAACGAT
GAGTTGCTGT TGAATTTAAG GCCGAGCAAC TACATAGGTT ATGCTAGTGT GATTGCGAGG
AATATTGCTG AATCATGCAC TCAACTACTT AATAAGGCTG AGGATACTTG CATTAAGGAG
AGTGAGGCCA TGAGTGCGCT TGGGTTTAAG TGA
 
Protein sequence
MDILSPLDAR YRNELKGYHE VASEDAFIMY RAKVELLYLE FLIDKLSKLG LVKPINDEEK 
RRLRGIRLSS GDVNEVRRLE DELGHDVKAL EYVLRGRLKA IGLEDYAHLI HLGLTSEDVN
NLAMGIMIKR ILYEYLIPSL VDLGKVLVNL SNKYADTPML ARTHGQPATP TTFGKEIAYH
SHRLCSWIST LINLKINGKV AGASGSMASF TMIAQLDWPR ELMNFVSSLG LEPTPVATQI
LPPDNLNHII AAVGLTSYSL INLAQDMWMY SMLGYIKFKG RVIGSSTMPH KVNPVDLENA
EGNLKLGASM LMEISKILQS SRLQRDLSDS TIKRNLGLAM GYVVLGSRRL RKFMEGIEVN
EEALTNDLNN HWEVLSEAVQ VRLRVLGQAN AYEKSLKLFR VPRMSMSDYI NAIKELGVND
ELLLNLRPSN YIGYASVIAR NIAESCTQLL NKAEDTCIKE SEAMSALGFK