Gene Cmaq_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0016 
Symbol 
ID5709082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp28446 
End bp28673 
Gene Length228 bp 
Protein Length75 aa 
Translation table11 
GC content37% 
IMG OID641274519 
Producthypothetical protein 
Protein accessionYP_001539860 
Protein GI159040608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAAA TGAACGTACC AACTACAAAA ATCCCATTAG ATACAGTTAA GAAGACAGTG 
GTAAGGAGGA CTGTTAAGAG GATTAATGGT AGGGATGGTC ATGGTAGTGT AAGCTATATA
GCGTCAAACT CAAGGAATCC AGACAACATT GTGGTAATAT ACGGTATATT AACGCCACCA
ATAACGTACA CTTACGATGA GAGGAATAGA ATGTTTAAAG TAAACTAA
 
Protein sequence
MSEMNVPTTK IPLDTVKKTV VRRTVKRING RDGHGSVSYI ASNSRNPDNI VVIYGILTPP 
ITYTYDERNR MFKVN