| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_5080 |
|---|
| Symbol | |
|---|
| ID | 5704215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 5756209 |
|---|
| End bp | 5756847 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641274472 |
|---|
| Product | PadR-like family transcriptional regulator |
|---|
| Protein accession | YP_001539813 |
|---|
| Protein GI | 159040560 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.6626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000475922 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGAGT TCGCCATCCT CGGCCTCCTA CAGGAAGCTC CGATGCACGG ATACGAGCTG
CGTAAGGAGC TGGCCGCTAA ACTCGGCGCG ATCCGGGCGG CCATCAGCTA CGGCACGCTG
TACCCGACTC TGCGCCGCCT ACAGGCGGCG GGCTGGATCA CCGAGGCCAC CGAGACACCC
GCCACCGCCC CAGAGGTCCC CGCGCTGACC AGCCGCCGTG GCCGCGTGGT CTACAAGATC
ACCGCGGAGG GCAAGGAACG ATTCGCCCAG CTCATCGCCC AGGCCGGACC CGAGACATAC
GACGACACGG GGTTCGGCGT GCACTTCGCG TTCTTCGCCC GAACCGACCA GGCAACCCGA
CTTCGCATCC TGGAGGGTCG CCGCCGCAAG ATCGAGGAGC GCCGCGAAGG GCTCCGCGAC
GTACTCGGTC GCGCCGCCGA GCGGCTCGAC GCGTACACCC TGGAACTGCA ACGCCACGGC
CTGGATGCCT GTGAGCGTGA GGTCCGCTGG CTGGAGGAGC TCATCGCCAA CGAGCGCTCC
GGCCGTGCCC CGACGGCCCC GGTCACCGGG ACGGACGGCG GCCGACCAGA AGACAACAGC
CCGCCTCCGC CTGGAGAGTC CAGGAAAGAG CGGCCGTGA
|
|---|
| Protein sequence | MLEFAILGLL QEAPMHGYEL RKELAAKLGA IRAAISYGTL YPTLRRLQAA GWITEATETP
ATAPEVPALT SRRGRVVYKI TAEGKERFAQ LIAQAGPETY DDTGFGVHFA FFARTDQATR
LRILEGRRRK IEERREGLRD VLGRAAERLD AYTLELQRHG LDACEREVRW LEELIANERS
GRAPTAPVTG TDGGRPEDNS PPPPGESRKE RP
|
|---|
| |