| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_5060 |
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| Symbol | |
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| ID | 5705335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5728213 |
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| End bp | 5730729 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641274453 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001539794 |
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| Protein GI | 159040541 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00347473 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACCCAA ACACCAGGGA ACCGTTCGGG ACCGACAGGC GCCTGGCCGC GCTTGTCGGT
CTCATCGTGA CGCCGGCAGC AGCTGTCATC GTCGCCGCCC TCCTGGAGAT CGTCCACCGG
CCACCCCGCA CCGTGGCAGA CGCCGCGACC CTGATGACGA TCATCTTCAT GATCGCCGTG
GGGATCATGG TCAAGGCGCG GATCCGGATC AGGTCGACCA CGCACTCCAT CACCTGGAAC
GACGTGGCGA TCATCGTCGG CGTCGCGGTG GCACCGCTGC CCTGGGCGTT GATGTGCATT
GTGGTCGGCG TGGCGGTGGC GTCGGCGATA CAGCGGCTTC CGCGGATAAA GAGCACCTTC
AGTATCGGTA AGAACGTCCT CGTCGCCGCG GCGGCTGGAT GGGTCCTGAC ACTGTTCGGA
TGGCCAGGAG AATCAGCCAC ATTCACGGAT GTTCTCGTAC CCGTCACCGT CGCCTACGTG
GCCGCAGCGC TGGTGGACGA GGCCGCCACC ATCCCCGTGA TCGCGATTGC CTCCCGCACG
AAGATTCGCC GGCGGTTCGT CGACAACTGG GATATTCGGC TCAGCGGTGC CGCCGTCCGC
CTGGTGGTGA CGATAGGAAC GCTTTTCATC CTGCAGGTGG ACGCCCGCTT TCTGCTCGCC
GTACCGCCCC TCGTGCTCAG CCTGCACCTC GCTCATTCCG CCCGGATCAA CACCCGCACG
GAGCAGCGGG TCTGGCAGCG GCTTGCGCGC ACCACCGACG CGCTCAACGT CGTCGACCTC
GACCAGGTCC TCACCACCGC CGTCGCCCAG GCCGCCGAAC TGTTCAGCGC CGACGAGGTC
GAGATCGAAC TACGCGAGGG CGACCGGGCG GTACGAGGTG ACGGCGGTGG GATCACCTAC
GACGGGCCGG TCAACGAAAA CGACGATCCG GTCACCATCA ACATGCTGAC CATCCCGCTG
GAGGACCACG ACCAGACCGT GGACGTGGGA GTGCTCCGGC TACGGTTCCG TGAGCCGGTG
CGGCTCTCCG AACGCGAGCA GTACACCCTG CGCACCTTCG CGTCGGCGCT GTGCACTGCC
GTACGCAACG CGCAGGCGTA CGCGGAACTG GCCCGGGTCG CCGCCGAGCA CGCGTACGCC
GCCACCCACG ACGCCCTCAC CGGGCTGGCG AACCGTCGGC GTCTCCTGGA CGAGGGCGCC
GGAGGCCTCA GCGCCCGGCA TGCCGAGGGT GTCACCGCCC TCATGCTGGT CGACCTCGAT
CACTTCAAGG AGGTCAACGA CACGCTCGGT CACGCCGCTG GGGATCAGGT CCTGATTCGG
GTCGCGGACC GGCTGCGCGC CACCGCCCAA CCCACCGATC TGGTAGCCCG GCTGGGTGGC
GACGAGTTCG CCGTCCTCCT GCGGGGCCTG CCCGCCCCGG CGGTGGCCAT GCACCGGGCG
GAGATCCTGA TCGCCGCCCT GCGCGAACCG TTCGACCTCG ACGGCCTGCG GATCAGCGTC
GAGGCGAGCA GTGGCGTCGC GGTGGCCCCG GCCACCGGCG GCATGGCCGA ACTACTCCGC
CGTGCGGACG TCGCGATGTA CCAGGCCAAA CGGTTTGGCC AGCGCGTCTT CAGGTACGCG
CCGAGCCGGG ACACCGCCGA CATCGCCCGA CTCACCCTCG GTGGAGACCT GCCCCGAGCC
GTCGCCGACC ACGAGTTCAC CGTCACCTTC CAGCCGATCA TCGACCTCGG CACCGGCGCC
GTGGCCGGCG CCGAGGCACT CGCCCGGTGG CACCACCCGA CCCACGGCGT GATCGACCCG
CTACGGTTCC TCGAGGTGGT GGAGCGTTCC GGCCTGCTTC CCGCGTTCGC CGGAACGATC
CTCGACCAGG CGCTCGTCGC GGCCGATAGC TGGCGGAAAG CCGGTTTCGA TGTGCCGGTC
GCGGTGAACG TTTCGCCCCG CAGCCTGTTG GACCCCGACT TCCCCTGCTC GGTGCTGGCC
CGCCTTCGCG CCCACGACCT CCCACCCGAC CGCCTTGTGC TGGAGCTGAC CGAGACCCTC
ACCCTCAGTC AGCTCGACAT CGTTGACCAG GTGCTCGGCC GGCTCCGTGA CGAAGGGGTC
CGGCTCGCTC TCGATGACTT CGGCACGGGC TACTCGTCAC TGTCGCTGCT CTCCCGCATC
CTGGTCCACG AGCTGAAGAT CGACCGAAGC TTCGTCACGG ACATGGAGAG CTCACCGGAG
GCCGCCGCCG TCATCCGCTC GACACTGGAT CTCGGCCGCA GCCTCGACCT GACCGTGATC
GCCGAGGGCG TGGAGAACGA ACCGCAGCGT CGCGCCCTGT GGGAACTGGG CTGTACCGGC
GGGCAAGGGT ACCTTTTCGC CCGGCCGATG CCCGCCGGCA CGTTGCTGGA GACGCTGCGT
CGGGGCCCCG GTGGCCGGCC CGGCACACTC GCCGCACCGC TACACGACGC AGGTGCGGTC
GTCCGCCTAC CCGCCGGACG TCGGCCCGGC CCCCGCGGTC GCCACCAGCC GGCCTGA
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| Protein sequence | MDPNTREPFG TDRRLAALVG LIVTPAAAVI VAALLEIVHR PPRTVADAAT LMTIIFMIAV
GIMVKARIRI RSTTHSITWN DVAIIVGVAV APLPWALMCI VVGVAVASAI QRLPRIKSTF
SIGKNVLVAA AAGWVLTLFG WPGESATFTD VLVPVTVAYV AAALVDEAAT IPVIAIASRT
KIRRRFVDNW DIRLSGAAVR LVVTIGTLFI LQVDARFLLA VPPLVLSLHL AHSARINTRT
EQRVWQRLAR TTDALNVVDL DQVLTTAVAQ AAELFSADEV EIELREGDRA VRGDGGGITY
DGPVNENDDP VTINMLTIPL EDHDQTVDVG VLRLRFREPV RLSEREQYTL RTFASALCTA
VRNAQAYAEL ARVAAEHAYA ATHDALTGLA NRRRLLDEGA GGLSARHAEG VTALMLVDLD
HFKEVNDTLG HAAGDQVLIR VADRLRATAQ PTDLVARLGG DEFAVLLRGL PAPAVAMHRA
EILIAALREP FDLDGLRISV EASSGVAVAP ATGGMAELLR RADVAMYQAK RFGQRVFRYA
PSRDTADIAR LTLGGDLPRA VADHEFTVTF QPIIDLGTGA VAGAEALARW HHPTHGVIDP
LRFLEVVERS GLLPAFAGTI LDQALVAADS WRKAGFDVPV AVNVSPRSLL DPDFPCSVLA
RLRAHDLPPD RLVLELTETL TLSQLDIVDQ VLGRLRDEGV RLALDDFGTG YSSLSLLSRI
LVHELKIDRS FVTDMESSPE AAAVIRSTLD LGRSLDLTVI AEGVENEPQR RALWELGCTG
GQGYLFARPM PAGTLLETLR RGPGGRPGTL AAPLHDAGAV VRLPAGRRPG PRGRHQPA
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