| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_5038 |
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| Symbol | |
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| ID | 5707309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5705320 |
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| End bp | 5706516 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641274431 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001539772 |
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| Protein GI | 159040519 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00742101 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCACAGT TGAACCGCCG GCACGCACTA CAGCTCCTGG CCGCACTCGG CACCGCCGGC
CTCGTGGCCG GATGTGGCGA CAACGGCGAG TCCGAATCCG GCACCCGCCC GAACCCTATC
AAGATCGGCA TGCTCGTGCC GCAGAACGGC GATCTCAAGG AGGTCGGGGT CGAGGTCGTC
AACGGCTTCC AGCTCTTCCT GGATCTCAAC GAGGGACGAC TCGGCGGACA TCCCACCGAG
TTGATCATCG CCGACGAGGG TGCCGACGCG CAGTCCGGCC AGGCCGCGGT CGAAGGTCTA
CTCGAGCAGG GAGTGCTGTC TCTCACCGGC GTGGTCGGCT CGGCCGTCAT GCTCGGCATC
CGGGACATGG TGGAGCAGGC CCGGGTGCCG TTGGTCGGCT CCAACGCGTC ACCCACCAGC
CTGCAGAGCG TCGTCTACAT CTGGCGCACG TCGTACGTGC TGGACGAGGC CGGTCGAGCC
CTCGGCCTGT ACCTGAAGGC GACGCTCGAT CCGTCGGAGC GGCTGGCGAT CATCATGCCG
CAGTCCCCGG CCAGCCAGGA CGTGCTGCGG GGTTTCCAGC AGGAATTCGG TGAATCCGAT
CCACGAATCG GACGCGTCAC CTGGACGGAG GATATCTCCG GCACCCCGAG CAAGTCCGCC
TACCGCCGCG ACATCAACAC CGCCCTCCAG CGTGACCCGG ACGGTGTCCT CTGCTTCTTC
ACCGGCGCCG CCGCCGTGGA GTTCCTCAAA CAGCTCCGCG CCGCGGGATA CACCGGCCCC
GTCTACGCCC CGGGCTTCCT CACCGAAGGG AACTTCCTGG CGAGTTTCAA AGACGAGGCG
GATGTTCTCG GCATCCAGAC CGCCCTGAAC TACTCCCCCG ACCTCAACAA CGCGGCCAAC
AGGCACTTCG CCTCGGCGTA CCGCAAGAAG CACGGCACCT CGCCGACCGC GTACGCGACG
GCGTCGCACG ACGCGGCGCG GGTCCTCAAC CAGGCGATTC GGCGCGCTGG CGGGTCACCC
ACCCCACAGG AGGTGAACCT CGCCCTCGGA AAGATCGGCC GGATCGACAG CCCACGTGGG
GTGTGGCAGT TCAACCAGAC GCGCACCCCG CAGCAGCGGT GGTATCTCCG GGAGGTCCAG
TTGGACGGTC AGGTGCTGTC CAACGTGCTG TTGACTGAGC TGGCCACGCT CGGTTGA
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| Protein sequence | MPQLNRRHAL QLLAALGTAG LVAGCGDNGE SESGTRPNPI KIGMLVPQNG DLKEVGVEVV
NGFQLFLDLN EGRLGGHPTE LIIADEGADA QSGQAAVEGL LEQGVLSLTG VVGSAVMLGI
RDMVEQARVP LVGSNASPTS LQSVVYIWRT SYVLDEAGRA LGLYLKATLD PSERLAIIMP
QSPASQDVLR GFQQEFGESD PRIGRVTWTE DISGTPSKSA YRRDINTALQ RDPDGVLCFF
TGAAAVEFLK QLRAAGYTGP VYAPGFLTEG NFLASFKDEA DVLGIQTALN YSPDLNNAAN
RHFASAYRKK HGTSPTAYAT ASHDAARVLN QAIRRAGGSP TPQEVNLALG KIGRIDSPRG
VWQFNQTRTP QQRWYLREVQ LDGQVLSNVL LTELATLG
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