| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_5037 |
|---|
| Symbol | |
|---|
| ID | 5707308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 5704438 |
|---|
| End bp | 5705244 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641274430 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001539771 |
|---|
| Protein GI | 159040518 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0490595 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCG ACCCACGTGC CGTGCTCACG CGCCCCGCGC CGGCCCCGGA CCTCACCGTC
GCGTACGACC ACCATCCGGA CCAGATCGCG GATCTACGCC GGCCGACCGG CGCCGGCCCG
GCCCGGCGAC TGGTGATCGT CGTGCACGGT GGCTTCTGGC GAGCGGAGTA CGACCGCCGG
CACACCGCGC CACTGGCGAC CGCGCTGGCC GCGCTCGGCC ACCCGGTGGC GCAGGTCGAG
TACCGACGCA CCGGGCAGCC GGGCGGCGGC TGGCCGGGAA CCCTGACCGA CGTCCTGACC
GGGGTGTCCG AGCTGCCCCG GCTGGCAGCC GAGGCGTTCC CCGACGCGGT GGCGGCCGGC
CCGCCGGTCC TCATCGGTCA CTCGGCTGGC GGGCAGCTGG CGCTGTACGC CGCCGCCACC
ATGCCCACCG CGGTCGGCGG TGTCCTCGCC CTGGCTCCAG TGGCGAACCT GGCCGAGGCG
TACCGGCTGG ACCTCGACAC CGGCGCGGTG GGTGCACTGC TCGGCGGCGG ACCGACTGAG
GTGCCGGACC GGTACGCGGC CTGTGATCCG CGATCACTGC TGCCGATAAG CTCACGGATA
GTAGTCATAC ATGGCGCACT CGACCGGCAG GTACCGGTGG CGATGAGCCG GGAATTCGCC
GCCGCCGGGT GCGCCGCCGG CAGTGACGTA AACCTCATTG AGCTGCCCAC ATGCGAGCAT
TTCAGCCTCA TCGACCCAGA ATCGGAGGCT TGGCCGGATG TTGCCGATGC GTTGCGCTCT
ATCACCCGAG AATTGCCAGG AAGTTGA
|
|---|
| Protein sequence | MSSDPRAVLT RPAPAPDLTV AYDHHPDQIA DLRRPTGAGP ARRLVIVVHG GFWRAEYDRR
HTAPLATALA ALGHPVAQVE YRRTGQPGGG WPGTLTDVLT GVSELPRLAA EAFPDAVAAG
PPVLIGHSAG GQLALYAAAT MPTAVGGVLA LAPVANLAEA YRLDLDTGAV GALLGGGPTE
VPDRYAACDP RSLLPISSRI VVIHGALDRQ VPVAMSREFA AAGCAAGSDV NLIELPTCEH
FSLIDPESEA WPDVADALRS ITRELPGS
|
|---|
| |