| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_5005 |
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| Symbol | |
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| ID | 5705460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5673522 |
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| End bp | 5674382 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641274398 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_001539739 |
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| Protein GI | 159040486 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.952143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000288771 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCCGAAC TACCGGAGGT AGAGGCGCTC GCCGATTATC TGCGTCGACG CGCCGTCGGC
CGGCGGGTCG ACCGCCTGGA GATCGCCGCG ATCAGCGCCC TGAAGACGTA CGACCCGGCA
ATCACGGCGG CGGCTGGTCG GCAGGTCACC GACGCCCGGC GGCTCGGCAA GTTCCTCGAC
CTGGTGCTCG ACGCCGACCT GCACCTGGTG ATCCACCTTG CCCGCGCGGG CTGGCTACAG
TTCCGGGAGG AGTTCCCGTC CCGTGGCCCG CTACGCCCCG GCAAGGGTCC GGTGGCACTG
CGGGTACGCC TCGACGACGG CTCCGGCTTC GACCTGACCG AGGCCGGTAC GCAGAAGAGT
CTCGCCATCT ACCTGGTGAC CGATCCGGCG GTGGTGCCCG GGGTGGCCCG GCTCGGCCCG
GACGCGCTCG CCGTCGACCC GGCCACCTTC GCCGAGCGAC TCCGCGGCCG CAGGGGCCAG
GTCAAGGGGG TACTCACCGA TCAGACGGTG CTCGCCGGGG TGGGCAACGC GTACTCCGAC
GAGATCCTGC ACACGGCCCG GTTGTCACCG TTCGCGCTGA CCTCCCGGCT GACCGACGAC
CAGCTGGCCG CCCTGCACAC GGCGACCCGG GACGTGCTCG GCGAGGCGGT GTCCCGGTCG
GTGGGACAAC GGGCTGCGGA GCTCAAAGGC GAGAAGCGCT CCGGGCTACG GGTACACGCC
CGAACCGGGC TGCCCTGCCC GGTCTGTGGT GACACCGTAC GGGAGGTCTC CTTCGCTGAT
TCGAGCCTCC AGTACTGTCC GGCGTGCCAG ACCGGCGGAA AGCCGCTCGC GGACCGACGG
TTGTCCCGAC TTATACGGTG A
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| Protein sequence | MPELPEVEAL ADYLRRRAVG RRVDRLEIAA ISALKTYDPA ITAAAGRQVT DARRLGKFLD
LVLDADLHLV IHLARAGWLQ FREEFPSRGP LRPGKGPVAL RVRLDDGSGF DLTEAGTQKS
LAIYLVTDPA VVPGVARLGP DALAVDPATF AERLRGRRGQ VKGVLTDQTV LAGVGNAYSD
EILHTARLSP FALTSRLTDD QLAALHTATR DVLGEAVSRS VGQRAAELKG EKRSGLRVHA
RTGLPCPVCG DTVREVSFAD SSLQYCPACQ TGGKPLADRR LSRLIR
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