| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_5002 |
|---|
| Symbol | |
|---|
| ID | 5705742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 5670431 |
|---|
| End bp | 5671501 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641274395 |
|---|
| Product | glycerol-1-phosphate dehydrogenase (NAD(P)(+)) |
|---|
| Protein accession | YP_001539736 |
|---|
| Protein GI | 159040483 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0371] Glycerol dehydrogenase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000318278 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCTGC TAGCCCGCAC CGTCGCCACC CCCCTCGCCA TCGAGGTCCG CCGGGGTGCG
GTCGCCGACC TCGGTGAACT CCTCGCCGAC CGGCGGATCT CCGCCGGCGG CGACGTGGCC
GTGGTGGTGG GGCCCGGGCA GGGGGAGAAG GTCGTCGACC TGTGCCGGCC GACGCTGGGC
TCAGCCGACG TGTTCACGGT GACAGGTGGC AGCGTCGACT CGGCCATCGA GCTGGGCGAC
CTGTTACGCC ACCGGCACTA CGACGCGGTG GTCGGGATCG GCGGCGGCAG GACGATCGAC
ACCGCCAAGT ACGCCGCCAC CCGCTACGGC CTCCCGATGG TCACGGTCGC CACGAGCCTG
GCCAACGACG GCATCGCCTC CCCGGTGGCG TCCCTGACCC ACGACGGCGG CAGGGGTTCG
TACGGGGTGC ACATCCCGAT CGCCGTCCTG GTGGACCTCG ACTTCGTGGA GCACGGCCCG
GACCGGCAGA CCCAGGCTGG GATCGGTGAC GCGGTGAGCA ACCTCAACGC CTGCGCCGAC
TGGGAGCTGG CCCACGAGAT ACGCGGCGAG CCGATCGACG GGCTGGCCGT GACGCTGGCC
CGGACAGGTG CCGAGGCGCT GCTGAACCAC CCCGGCAAAA TCACCGACGA CGCGTTCCTC
ACCACGCTGG CGGAAGCGCT GATCCTCGGC GGCATCGCCA TGTCGATCTC CGGTTCGAGT
CGGCCCGCCA GCGGCGGCGA CCACGAGATC TCGCACGCCA TCGACCACCT TTGGCCCGGC
ACCGGCAGCA CCCACGGCGA ACAGGCCGGG CTGGGGGCCC TCTTCTGCAC CTGGTTGCGC
GGGGACCGGG ACCGGTTCGG CCAACTCGCC CGGTGCCTGC ACCGGCACGG CCTGGCCACC
CGCCCGGCCG ACCTGGGCCT CACCGACGAG CAGTTCGTCA CGGCGGTGCA CTTCGCGCCA
CGGACCCGGC CGGACCGCTA CACGATCCTC GAACACCTCA CCCTGTCTGC CGATGACCTC
CGGGCCCGGT TGGGAGACTG CGTTGACGCC GTCAGTGAAC ACCTTGGCTG A
|
|---|
| Protein sequence | MPLLARTVAT PLAIEVRRGA VADLGELLAD RRISAGGDVA VVVGPGQGEK VVDLCRPTLG
SADVFTVTGG SVDSAIELGD LLRHRHYDAV VGIGGGRTID TAKYAATRYG LPMVTVATSL
ANDGIASPVA SLTHDGGRGS YGVHIPIAVL VDLDFVEHGP DRQTQAGIGD AVSNLNACAD
WELAHEIRGE PIDGLAVTLA RTGAEALLNH PGKITDDAFL TTLAEALILG GIAMSISGSS
RPASGGDHEI SHAIDHLWPG TGSTHGEQAG LGALFCTWLR GDRDRFGQLA RCLHRHGLAT
RPADLGLTDE QFVTAVHFAP RTRPDRYTIL EHLTLSADDL RARLGDCVDA VSEHLG
|
|---|
| |