Gene Sare_5000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_5000 
Symbol 
ID5705740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5669086 
End bp5669478 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content69% 
IMG OID641274393 
Productsignal-transduction protein 
Protein accessionYP_001539734 
Protein GI159040481 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000125843 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGTTC GGGAAGCGAT GTCCAGCCAG GTTCTCGTGG TCGGCCCGGA GCACACGCTC 
CGCCAGGCTG CTCGGATGAT GTCGGAACGG GGAATCGGTT CGGCGGTCGT GATCGACCCG
GACTCCGAGG GAGTCGGGAT CATGACCGAG CGGGACGTGC TCAATGCGAT CGGGGCTGGG
CTGGACTGTG ATGTCGAGCG GACCGGAGCC CACCTGACCT GGGACGTGGT GTACGCGGGA
CCGGAGTGGA CGGTCGAGGA GGCGGCCACG GCCATGGCCC GGGGCGGGTT TCGGCACTTG
GTGGTGCTCG ACGGGCGCGA GGTCGCCGGC GTGATCTCGC TTCGGGACGT CATGCGGGTC
TGGGCGACCG CCCGGGTGGT CGAAACCGCC TGA
 
Protein sequence
MQVREAMSSQ VLVVGPEHTL RQAARMMSER GIGSAVVIDP DSEGVGIMTE RDVLNAIGAG 
LDCDVERTGA HLTWDVVYAG PEWTVEEAAT AMARGGFRHL VVLDGREVAG VISLRDVMRV
WATARVVETA