Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_5000 |
Symbol | |
ID | 5705740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5669086 |
End bp | 5669478 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641274393 |
Product | signal-transduction protein |
Protein accession | YP_001539734 |
Protein GI | 159040481 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000125843 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGGTTC GGGAAGCGAT GTCCAGCCAG GTTCTCGTGG TCGGCCCGGA GCACACGCTC CGCCAGGCTG CTCGGATGAT GTCGGAACGG GGAATCGGTT CGGCGGTCGT GATCGACCCG GACTCCGAGG GAGTCGGGAT CATGACCGAG CGGGACGTGC TCAATGCGAT CGGGGCTGGG CTGGACTGTG ATGTCGAGCG GACCGGAGCC CACCTGACCT GGGACGTGGT GTACGCGGGA CCGGAGTGGA CGGTCGAGGA GGCGGCCACG GCCATGGCCC GGGGCGGGTT TCGGCACTTG GTGGTGCTCG ACGGGCGCGA GGTCGCCGGC GTGATCTCGC TTCGGGACGT CATGCGGGTC TGGGCGACCG CCCGGGTGGT CGAAACCGCC TGA
|
Protein sequence | MQVREAMSSQ VLVVGPEHTL RQAARMMSER GIGSAVVIDP DSEGVGIMTE RDVLNAIGAG LDCDVERTGA HLTWDVVYAG PEWTVEEAAT AMARGGFRHL VVLDGREVAG VISLRDVMRV WATARVVETA
|
| |