| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4989 |
|---|
| Symbol | |
|---|
| ID | 5706138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5657990 |
|---|
| End bp | 5659444 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641274382 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001539723 |
|---|
| Protein GI | 159040470 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.784849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000215564 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACC ACCGGGTCGA CCATCCGACC GTGGCGTTGC CGGTGGCCGG CGCCCGGCGG
CCCCCGTTCA CCCGGCACGG GCAGACCCTG ACCGTCCGAG CTGTGCTGGT GACCTGCGCC
GTTGCGCTGG TCTCGGTCCT GGTCACCGCG ATCGTCGCGG TGCCGCTCGC GGTACGCGGG
GTGGAACGGC GCGAGCAGCA GGCGCTGGCC GGCCAGGCCC GGCTCGCCGC CGAGGCGCTG
CGCAGCCGCC TGGAGACCCC CCGACCGATG GACGAGGATC GACTGCTGCG GCAACTGCGG
GCGCAGGGCA TCGAGGCATA CCTGGTCCGT GACGGGGTGG TTGACCGGCC GGGTCTGCCG
ACCCAGGTCG TGCGGCGGAT CGCCGAGGGC AGGAACGTCT CCGGTCGCCG GTCGGTCGCC
GGCCGGCCGG CCTTGGTGCA GGGGCGGGCA CTGTCGCGCG GCGACGGGGT GGTACTCGCC
CGGTCCGGTT CGCTCGGCGG AATGTGGCGG CAGGTCGCGC ACAGCCTCTG GCTCCCCCTG
CTCGCCGGGC TGACAGCCGG CGTGGTCGCC GGTCTGCTGC TCGCCCGCCG CCTGGCTCGA
CCGATTCGAC GGGCGGCGGA CGCGGCCGCA CGGCTGCGGG CCGGTGAACG CGAGGTTCGC
GTCCCGGTGG AGCCCCCGGA CGAGGTGGCG GATCTGGCGG AGGCCCTCAA CGGCCTGGCT
GCCGCGCTCG CCACCAGTGA GGGACGGCAG CGGGAGTTCC TGCTCTCCGT CTCGCATGAG
CTGCGGACTC CACTGACTGC CATCCGCGGC TACGGGGAGG CACTGGCGGA CGGCGTGATC
GACCCGGCGG AGGTGACCGG AACCGGCCGC ACCATTCTGG CCGAGGCGGA ACACCTGGAT
CGGCTGGTGC GTGACCTGCT GGCCCTGGCC CGGTTGGAGG CTGCGGACTT TCCGCTGGAA
CCGGTACCGG TCGACCTGGT CCGGTTGGTC GCTGACGCGG AGCGGACGTG GGCGGCACGG
TGCACGGCCG TCGGGGTGGC CTTCCGGGCC GAGGTTCCGG ATCAGGCGGT ACCGGTGTAC
ACCGACCCGG GGCGGATTCG GCAGGTGGTG GACGGGCTGT TGGAGAACGC GTTGCGGGTC
GTACCCCCGG GGGCGCCGGT GGTGCTCGCG GCCCGGCCTG CCGGCCCTGA CCCGGCGTCC
GGCGGGGTGA TCGAGGTCCG GGACGGCGGC CCCGGCCTGA CCGACGACGA CCTGGCGGTG
GTGTTCGAGC GTGGTGCGCT GCACCAGCGG TACCGGGGAG TGCGCAAGGT CGGCAGCGGG
CTGGGCCTGG CCCTCGCCGC CGGCCTGGTC CGGCGGCTCG GCGGGGAGAT CACCGCGGGG
CACGCGCCGG AGGGCGGCGT GGCCTTCGTC GTGTCGCTGC CGCCGGATCC TTACCGGATT
CGAACCTCGG CCTGA
|
|---|
| Protein sequence | MRDHRVDHPT VALPVAGARR PPFTRHGQTL TVRAVLVTCA VALVSVLVTA IVAVPLAVRG
VERREQQALA GQARLAAEAL RSRLETPRPM DEDRLLRQLR AQGIEAYLVR DGVVDRPGLP
TQVVRRIAEG RNVSGRRSVA GRPALVQGRA LSRGDGVVLA RSGSLGGMWR QVAHSLWLPL
LAGLTAGVVA GLLLARRLAR PIRRAADAAA RLRAGEREVR VPVEPPDEVA DLAEALNGLA
AALATSEGRQ REFLLSVSHE LRTPLTAIRG YGEALADGVI DPAEVTGTGR TILAEAEHLD
RLVRDLLALA RLEAADFPLE PVPVDLVRLV ADAERTWAAR CTAVGVAFRA EVPDQAVPVY
TDPGRIRQVV DGLLENALRV VPPGAPVVLA ARPAGPDPAS GGVIEVRDGG PGLTDDDLAV
VFERGALHQR YRGVRKVGSG LGLALAAGLV RRLGGEITAG HAPEGGVAFV VSLPPDPYRI
RTSA
|
|---|
| |