Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4984 |
Symbol | |
ID | 5706133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5654316 |
End bp | 5654753 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641274377 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001539718 |
Protein GI | 159040465 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR01950] redox-sensitive transcriptional activator SoxR |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000669635 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGGAGT CATTGACCAT CGGCCAGCTC TCCGCGCGCA GCGGGGTGGC CTCATCCGCG CTGCGCTACT ACGAGCGGAT CGGGCTGCTC CGGGCCGACC GCACCGGTGG CAACCAGCGC CGCTACGCGC GCAGTGAACT GCGCCGGGTG GCCTTCATCC GGATCTCCCA GCAGGTCGGC ATCACGCTGG ACGAGATCCG CGAGGCACTC GACTCCCTAC CCGCCGCCCG TACCCCGACA CCCGAGGACT GGACCCGGCT CTCCACGCTG TGGCGGGACC GGCTGGACGA AAAGATCACG CTCCTGACCC GGCTCCGGGA CAACCTCGAC GGGTGCATCG GCTGCGGGTG CCTGTCGTTG CGCCGTTGCA CGCTCAGCAA CCCGGGTGAC GAGGTCGCCG GCGAGGGCCC CGGCGCGCGC CTGGCGGTGC CGCGCTAG
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Protein sequence | MQESLTIGQL SARSGVASSA LRYYERIGLL RADRTGGNQR RYARSELRRV AFIRISQQVG ITLDEIREAL DSLPAARTPT PEDWTRLSTL WRDRLDEKIT LLTRLRDNLD GCIGCGCLSL RRCTLSNPGD EVAGEGPGAR LAVPR
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