| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4975 |
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| Symbol | |
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| ID | 5706187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5646612 |
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| End bp | 5647373 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641274370 |
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| Product | peptidase A24A prepilin type IV |
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| Protein accession | YP_001539712 |
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| Protein GI | 159040459 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00228115 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGATCG ACATGCTGGT GACCATCTCC GACCGCACCA CGAGCCGCTC ACTGCTGGCC
GTGCTCGCGG TCACCCCGGT GCTCCGGCTC GCTGCCGTAC GGCACGCCGT ACCCGCGGGG
TCGACGGCCC GGCTCGGCTG CGACGCCTGC GGCACCCCGG TCAGCCTGGC CCGACCGTGG
CCGGCGATCG GCCCGCGCGC TCGGTGCGGG CCATGCGGCA CACGAGTCGG CCCGCCACCC
GGCTCGGTGG AGGTCGCCGC ACTCGCCGCC GGCCTGACAC TGCTGCTGGC CGGCCCGCCA
GCGGTCGAAC TGGCCGCGGC GGCCTGGTGG CTCGGCTGGG CGGTACCCCT CGCGTTCATC
GACGTCTCCG TGCACCGCCT GCCGGACCGG CTCACCATCC CCGCCGCGCT CGGCACCTGG
CTGCTGCTCG GGCTGGCCGC CGCCCTCGAC GCCGGGTACA CCCCCTGGCT GCGCGCCACC
GCCGCCGGGC TCGGCCTGGG CCTGCTCTTC GCCGCCAGCA CCATCCTGCT CGGCCGACGC
GGATTCGGTC TGGGCGACGC GAAACTCGCG GTCGGTGTGG GCCTGCTACT CGGCTGGCAC
GGCCTGGCGT TCCTGGTGCT CGGGCTGCTG TTCGCGTTCA CGCTCGCTGC CGTGACCGCC
CTGGCGCTGC TCGCCACCCG TCGGATCCGC TGGTCCAGCC ACCTGCCCTT CGGGCCGTTC
CTCCTCCTCG CCACCCCGAC CGCGCTCCTA CTCGCTGGGT GA
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| Protein sequence | MEIDMLVTIS DRTTSRSLLA VLAVTPVLRL AAVRHAVPAG STARLGCDAC GTPVSLARPW
PAIGPRARCG PCGTRVGPPP GSVEVAALAA GLTLLLAGPP AVELAAAAWW LGWAVPLAFI
DVSVHRLPDR LTIPAALGTW LLLGLAAALD AGYTPWLRAT AAGLGLGLLF AASTILLGRR
GFGLGDAKLA VGVGLLLGWH GLAFLVLGLL FAFTLAAVTA LALLATRRIR WSSHLPFGPF
LLLATPTALL LAG
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