| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4969 |
|---|
| Symbol | |
|---|
| ID | 5706181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5640680 |
|---|
| End bp | 5641582 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641274364 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_001539706 |
|---|
| Protein GI | 159040453 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0240973 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACACCA TCGTCGACGT CGAACTCGTC GCGGTGCTCT CCGGAGCAGC CTGCGCGGCC
GGGCTGCTGC TCGCCGTCGT CGCGATCGTC GGCACCCGCC GTCCGCCCGG GCGGCGCCCC
GGCGCCGGGC GCGGGATCAG CCGGCTGGTA TTCGGCGCCA CCCCCCAGGA GCGGCGAATC
CACCAACTGC TGCTGGTCGG CGCGGTGTTC GCCGGCGCGC TGGGGTTTTT GCTGACCGGG
CTTCCGGTGG TCGGTTTGCT GGTCGCTGTC GCGGTTCCCG GCGCGCCCTG GCTCTTCTCG
GTCGGCCGGG CCGAGCAGCG GGCCATCGCC CGCGTCGAGG CGGTCGGTGA GTGGACCCGA
CGGCTCAAGG ATGTGTCAGC CACCGGGCAG GGCCTCCAGG CCGCGATCAC CGGCACCGTC
GCCACCGCGC CCGAGGAGAT CCAGGAGGAG GTGCGGCTGC TCGCCGCTCG CCTCCAAGCC
GGCTGGCTGG CCCGTCCCGC CCTGCTGGCC TTCGCCGACG AGATCGCCGA TCCGGTCTGC
GACCAGGTGG TGGCGGCGTT GATTCTGCAC CTGACCGACC GGGGTGAGCG CCTCGGCGAC
GTGCTCGGCT CCATCGCGTC AGCCGCCAGC GCCGAGGTTG CCACCCGGCG GGAGATCGAA
GCCAAACGTA CCCAGCCCCG GTTCGCGGTC CGCTTCCTCA CCGGAATGAC CCTGGCGGTG
CTCGCGTACG GGCTGCTCAA CACCGACTAC ATCCGTCCGT ACGGCACCCC GACCGGACAG
CTCGTGATGG CGGTGCTCGG GGTGGCCTTC GTTGTCCTGC TGGCCTGGGT ACGCGCGATG
AGTCAGCCGC AACGGCCGGC CCGTTTCCTG CCGGCGCCCG ACCCGCAGGA GGTGGTGACG
TGA
|
|---|
| Protein sequence | MNTIVDVELV AVLSGAACAA GLLLAVVAIV GTRRPPGRRP GAGRGISRLV FGATPQERRI
HQLLLVGAVF AGALGFLLTG LPVVGLLVAV AVPGAPWLFS VGRAEQRAIA RVEAVGEWTR
RLKDVSATGQ GLQAAITGTV ATAPEEIQEE VRLLAARLQA GWLARPALLA FADEIADPVC
DQVVAALILH LTDRGERLGD VLGSIASAAS AEVATRREIE AKRTQPRFAV RFLTGMTLAV
LAYGLLNTDY IRPYGTPTGQ LVMAVLGVAF VVLLAWVRAM SQPQRPARFL PAPDPQEVVT
|
|---|
| |