| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4942 |
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| Symbol | |
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| ID | 5706492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5611099 |
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| End bp | 5612661 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641274337 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001539679 |
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| Protein GI | 159040426 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.953244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGACT TCGTAGTGGT CGGCGGCGGT ACAGCGGGTT GCGTCCTGGC AAGCCGGCTA
AGCGAGGACC CCTCCGTCAC GGTGTGCCTG GTCGAAGCCG GGCCAGCCGA CAATCACGAT
AACTTTCGTA TCCCGGTAGC TGGCGGGAAG TTCTTCAAAA CACGGTTCGA CTGGGACTAC
GACAGTCATC CTGAACAGTT CTGTGATGGC CGCCGTGTTT ACCTTCCGCA AGCGCGAGTG
CTCGGTGGCG GAAGCTCGGT TAATGGCATG GTCTACATTC GCGGGAATCG CGCCGACTAC
GACGAATGGC AGCAGCCGGG ATGGAGCTAC GACGAGTTAC TGCCGTTTTT CAAACGGTCC
GAGGACAACG AGCGGGGCGC TGATGAGTTC CACGGGGCCG GTGGACCGAT GCGGGTCAGT
GACGGACGCG CGCACAGCCC GAGCGCCATG GCCTTCACCC AGGCGGCACT CGACGCCGGC
TACCCGGCCA ACCCCGACTT CAACGGCGCG GTCCAGGAGG GCTTCGGGGA GTACCAGGTG
ACCCAGCGGG ACGGCCGTCG GGCCAGCGCG GTCACCGAGT TCCTGCATCC GGCGAGGCAC
CGTCCGAACC TCGTCGTCGA AACTAATCTG CAGGTACAGC GGATCATGAT CGAGAACGGG
CGGGCGGCCG GTGTGGTCGG CAACCGGTTC GACGACCTGG TCGAACTTCG GGCCGAGCGG
GAGGTCATTG TCTCCGCAGG CACGTACAAC TCACCACACC TGCTCATGCT CTCCGGGATC
GGGCCCGCCG ATCTACTGCG CGCCTTCGAG CTGCCGGTCT TTGTCGACCA GCCCCAGGTC
GGGCAGAACC TCCAGGACCA CCCGCACATC TGGCTCAGCT ACCGCCACGA TCTGCCGGTG
AGCCTACTGG CAGCGGCCGA GTCCGAGCGC GTCCACCAGT ACGAACGCGA TCGCACCGGC
ATGCTCGCCT CGAACGGTCC GGAGAGCGGC GGCTTCGTCC GGACCAGTGC GGCGCTGGCC
GGCCCCGACC TCCAGTTCAT CTGCCTGCCG ATGATGGTCG CGGACACCTT CCTCTCGCCA
CCGACCGGGC ACGGAGTCTC CTTCGGTGCC TCGGTGATGA GGCCGGTGAG CAGCGGCCAC
GTGACGCTGT TCAGCGGCGA GCCGACCGCC AAGCCCAAGA TCGTGCAGAA CTACCTCGCC
GATCCCGCCG ACCTGCAGAC GGCGGTCAGC GGCCTGCGGA TCAGCCTGGA GCTGTCCCGC
CAGGCCGCGC TGAAGCCCTA CGCCGTCGAG CCGTCCGCGG CGCCGAGTTC CGACACGGAA
ACCGACCTGC GGGCGTATGC GCGCAGCCAC GTCCAGACCG GGCTGCATCC GGTCGGTACC
TGCGCGATGG GCCGGGTCGT TGACGCGGAA CTGCGGGTGT TCGGAGTCGA CGGGCTGAGG
GTCGTGGACG CCTCCGTCAT TCCCTTGATC ATCCGGGGTA ACACGAACGC GCCGGTGATG
GCCGTGGCCG AGAGGGCGGC AGATCTCGTC CGCGGCGCAC AATCCCTGCC CGGCGCGAGG
TAG
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| Protein sequence | MYDFVVVGGG TAGCVLASRL SEDPSVTVCL VEAGPADNHD NFRIPVAGGK FFKTRFDWDY
DSHPEQFCDG RRVYLPQARV LGGGSSVNGM VYIRGNRADY DEWQQPGWSY DELLPFFKRS
EDNERGADEF HGAGGPMRVS DGRAHSPSAM AFTQAALDAG YPANPDFNGA VQEGFGEYQV
TQRDGRRASA VTEFLHPARH RPNLVVETNL QVQRIMIENG RAAGVVGNRF DDLVELRAER
EVIVSAGTYN SPHLLMLSGI GPADLLRAFE LPVFVDQPQV GQNLQDHPHI WLSYRHDLPV
SLLAAAESER VHQYERDRTG MLASNGPESG GFVRTSAALA GPDLQFICLP MMVADTFLSP
PTGHGVSFGA SVMRPVSSGH VTLFSGEPTA KPKIVQNYLA DPADLQTAVS GLRISLELSR
QAALKPYAVE PSAAPSSDTE TDLRAYARSH VQTGLHPVGT CAMGRVVDAE LRVFGVDGLR
VVDASVIPLI IRGNTNAPVM AVAERAADLV RGAQSLPGAR
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