Gene Sare_4939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4939 
Symbol 
ID5706489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5607471 
End bp5608307 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content66% 
IMG OID641274334 
Productalpha/beta hydrolase fold 
Protein accessionYP_001539676 
Protein GI159040423 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.1422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATC GAGCCGACGC CAACATGGAA CACATCGACT TCGAGGTACG TGACATCCCG 
CTCGAAACGG TGACGTCCGC GGATGGGACC ACCATCGCCT ACCAGAAGTC GGGAACCGGC
CCGCCCGTCG TCATCGTGGG AGGTGGGCTG AACGAGAAAG CTATGCACGC CGAACTCGCC
GAGGGGCTGT CCGCCAACTT CACGGTGTAC AACTACGACC GCCGCGGCCG AGGCGGGAGC
GGCGACACCG TGGCGGACCG GTACTCGGTG GACCGGGAAA TCGAGGACCT GGCGGCAGTG
ATCGCGGCCA CGGGCGGGCC CAGCCACGTC TTCGCCAACT GCACCGGCGG CATGATCGCC
GTCCCAGCAG CCGCCCGCGG GGTTCCGATA GCCAAGCTGG CCATGTACGA GCCCCCGTTC
GGTGGCCCGA AGGTCCCCGA GGGCTACCTC GAGGAGTTGA CCACTCTGCT CGCGGCGGAC
AACCGGACCG AGGCCGTGGC CATGTTCCTG AAATGGGACG CGCTGTTCAC CGACGACGAG
GTCGCCTTCT TCCAGACGCA TCCGATCTGG CCGGCCTTCG AGTCGATGGC ACCGACCATG
GTCTATGACT CGATCCTCAG CGAGGACGCC GACGCGCTCC CGACCGAACA ACTGGCCGCG
ATCACCGTAC CCAGCCTCGT GCTGTGCGGA AACGACAGCA TCGCCTGGAT GATCGAAACG
TGCCGGGCCC TCGCCGACGC GATGCCACAG GGGCAGCTGG TGAGCATGGC GAGCACAGGC
CACCTCATGG ATGACACGTT GGGCGCGGAG ATCCTGACGA GTTTCTTCCT CGAGTAG
 
Protein sequence
MADRADANME HIDFEVRDIP LETVTSADGT TIAYQKSGTG PPVVIVGGGL NEKAMHAELA 
EGLSANFTVY NYDRRGRGGS GDTVADRYSV DREIEDLAAV IAATGGPSHV FANCTGGMIA
VPAAARGVPI AKLAMYEPPF GGPKVPEGYL EELTTLLAAD NRTEAVAMFL KWDALFTDDE
VAFFQTHPIW PAFESMAPTM VYDSILSEDA DALPTEQLAA ITVPSLVLCG NDSIAWMIET
CRALADAMPQ GQLVSMASTG HLMDDTLGAE ILTSFFLE