Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4939 |
Symbol | |
ID | 5706489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5607471 |
End bp | 5608307 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641274334 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001539676 |
Protein GI | 159040423 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.1422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGATC GAGCCGACGC CAACATGGAA CACATCGACT TCGAGGTACG TGACATCCCG CTCGAAACGG TGACGTCCGC GGATGGGACC ACCATCGCCT ACCAGAAGTC GGGAACCGGC CCGCCCGTCG TCATCGTGGG AGGTGGGCTG AACGAGAAAG CTATGCACGC CGAACTCGCC GAGGGGCTGT CCGCCAACTT CACGGTGTAC AACTACGACC GCCGCGGCCG AGGCGGGAGC GGCGACACCG TGGCGGACCG GTACTCGGTG GACCGGGAAA TCGAGGACCT GGCGGCAGTG ATCGCGGCCA CGGGCGGGCC CAGCCACGTC TTCGCCAACT GCACCGGCGG CATGATCGCC GTCCCAGCAG CCGCCCGCGG GGTTCCGATA GCCAAGCTGG CCATGTACGA GCCCCCGTTC GGTGGCCCGA AGGTCCCCGA GGGCTACCTC GAGGAGTTGA CCACTCTGCT CGCGGCGGAC AACCGGACCG AGGCCGTGGC CATGTTCCTG AAATGGGACG CGCTGTTCAC CGACGACGAG GTCGCCTTCT TCCAGACGCA TCCGATCTGG CCGGCCTTCG AGTCGATGGC ACCGACCATG GTCTATGACT CGATCCTCAG CGAGGACGCC GACGCGCTCC CGACCGAACA ACTGGCCGCG ATCACCGTAC CCAGCCTCGT GCTGTGCGGA AACGACAGCA TCGCCTGGAT GATCGAAACG TGCCGGGCCC TCGCCGACGC GATGCCACAG GGGCAGCTGG TGAGCATGGC GAGCACAGGC CACCTCATGG ATGACACGTT GGGCGCGGAG ATCCTGACGA GTTTCTTCCT CGAGTAG
|
Protein sequence | MADRADANME HIDFEVRDIP LETVTSADGT TIAYQKSGTG PPVVIVGGGL NEKAMHAELA EGLSANFTVY NYDRRGRGGS GDTVADRYSV DREIEDLAAV IAATGGPSHV FANCTGGMIA VPAAARGVPI AKLAMYEPPF GGPKVPEGYL EELTTLLAAD NRTEAVAMFL KWDALFTDDE VAFFQTHPIW PAFESMAPTM VYDSILSEDA DALPTEQLAA ITVPSLVLCG NDSIAWMIET CRALADAMPQ GQLVSMASTG HLMDDTLGAE ILTSFFLE
|
| |