| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4935 |
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| Symbol | |
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| ID | 5707082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5601729 |
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| End bp | 5604818 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641274330 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001539672 |
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| Protein GI | 159040419 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.179334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCGGTG GGATCGACCG TGTCATCAAC AGCCATGGCG GTCTGGTGTT GGTCACCGGC
GAGGCCGGCA TCGGCAAGAC CGCCCTGGTC ACCTGGGCGG CAAACGAGGC CCGCCGATCC
GGTGCCCTGG TGCTGAGCGG CTCGTGCTGG GATTCGGAGA GCGCGCCGGG TTACTGGCCG
TGGGTGCAGG TTATCCGCGG GCTGCGCCGC AACATGTCCG AGCAGGAGTG GAGGGCAGCG
GACAGGGTCG CCGGCGGTGG CCTGGCGGTG CTGTTCGGCG AGCGCCCCGG CGACGCACCG
GACGGGTTTC AGCTGTACGA CGCGGTGACC ACCGCCCTGG TGTCGGCCTC GCAGCGCTGC
CCGGTCGTGG TGGTCCTCGA CGACCTGCAC TGGGCCGACG CCGCCTCGCT GCGGTTGCTG
GAGTTCGCCG CCCAACACAC CTGGTTCGAG CGGCTGTTGC TGGTGGGCAC CTACCGCGAC
GTGGAAATGG AGCAGATCGC GCACCCGATG CGCCCGCTGC TCCTGCCGCT GGTGGCCAGG
GCGACCACCG TGACGTTGAC GGGGCTGGGA CCGGAGGACG TCCATACCCT GATGGCCCGC
ACCGGGGACG CCGAGTTGGA CCCTGCGCTC GTCGCCGAGG TGCACCAGCG CACCGGCGGC
AACCCGTTCT TCGTGGAGCA GACCGCACGG CTGTGGCACA GCGGCGGGTC GGTCGCCGTG
ATCCCGCCCG GTGTCCGCGA TGCCGTACGC CGGCGGTTGT CGCTCCTGCC CGGTCCGGTC
GAGCGACTAC TCAGCACCGC CGCCGTGCTC GGCCGCGAGT TCCACCGGCA GCTGTTGGCG
GCTGTGGCCG CGTCCCCGGT GCCGCACGTC GACCGGCTGC TCGACCAGGC GGCGACCACC
CGGCTCGTCG TGGCCAAGGG TGCGGGTCGG TTCGCGTTCA CGCACGATTT GGTCCGCGAG
ACGCTGTACG AAGAGGTTGC CGACGTGGGC CGGCAGCATG CCGCGGTGGT GCGGGCGATC
GACGACGTAC CGGCGCTGGC GCAGCGGGTG ATCCCGGCCG ACCTGGCGCA CCACGCCTAC
CTCGCCGGCG AGCATCTCGA CCCGGCCCGC GCGGTCGAGT TGCTCGTCGC GGCCGCTCGT
GCTGCCACCG GCCGGCTGGC CACCGAGGAG GCGACCGGGC ACTACCGGCG GGCACTTGAT
CGCGCCCGTG GCGGCGGGTC CTGCCTGCAC GTGGTGGCCG CGCTTGACCT CGGCGAGCAC
CTGCACCAGA TGGGTGACAT CGACGGTGCC TGGCAGATCT TCGACGAGGC GGTGGCGCGG
GCCCGCGAGC ACGGCGACCC GCAGCTGCTG GCCCGCGTCG CGCTGACGCT GCACGAGGCC
GCCGGACGGG ACACGATCGA CCACTCGACC ACGGAGTTGC TCGACCTCGC GCATGCCGCG
CTGGTGCGCG ACGGCGCCCC GGCGGAGGAG CCGATGTCCA CCGACCGGCT CACGCATGAG
CTCGTGACCC ACCTGTCGGC GTCGGTGCGT GGCGGTGACG ACGACGCACT GGCCTTCAGC
CTCTGGGCCC GCTATCACAC GGTCTGGGGT CTGGGCACCG CGGCGGCGCG GGTGACGCTG
GCCGATGAGA TGACGGACGT GGGGCACCAG GTCGGTGATC CGCAGCTGGA GCACTTCGGG
GCGTCACTGC GCTGGGTGAC GCTGCTCGAG CTGGGCGATC CGGGTTACCT CGAGAAGTAC
GATGCCTTCG TCGCCCAGGC CGAACGCGAC GGTATGCCGC TGGGCACCTT TGCCTCGGAT
GTCGACCAGA GCATCATCAG CACCTTCTCC GGCCGCTTCG CGCAGGCTGA GGCCCTCCTC
GACCGGGCCG TCGACGCGGT GGAGGAAGAC CAGTTCGCTA GTTTCGGCTA CAAAGCCGAC
CATCTTCGTT GGGCTACGTG GTTGCTGCAG GGCCGCTACG AGGGGCTGGA CGACCTGCAC
CGCACCGCCG CCGACCGCGG CCATCCCCAT CCGCGGCTGC TGGCCGGCAT CAGCGCCATC
GAGCAGGGCG ACGTCGCCGC CGCGCTGGAG CATCTGCAGG CAGCGCCCGG GCCGTACCCG
CGCGAGTACG CGCCGTTGGG GGTACGGTTC CGCGCGCAGG TGGCAGCCGC CACCCGGGAC
CGCCAGCTGT GCACGCGGGT GCGTGCCGAA CTGGCTCCCT ACCGCGGCCA GTGGCTGGTC
TCGCTGTACG GCTGGGACAT CAGTGGCCCG GTCGACCACT GGATCGCGCT CGTCGACGCC
GCCCTGGAAC AGTGGACCGA CGCCATTACC GGGTTCACCG TGGCGCGCGA GTCCGCCGGC
CGGCTACGGG CCCGACCCTG GGCGATCGAG GCCGGTGTCC AGTTGGCCGG TGCGATGCTC
GCCCGGGACG GGGCCACGGA CGCCGCCGCG GCGCTGCTGG ACGACGTACG GCGAGAGGCG
GCAGAGATCG GAATGCGCCA CATCGGCGCG CGGGTCGATC GGGTCGGCGG CGCCCGGCCA
GGTTCGACCC GCTCGCCCGC ACTGGCCGGC GAGTTCCGCC GCGACGGTGC CGTCTGGCTA
CTCGGCTTCG GTGGCCGCAC CGTTCACATG CCGGCCACCA AGGGCCTGAA TGACCTGCGT
CTACTGCTGA GCCGGCCGGG CGTCGACATG CCGGCGGTTC GCCTGCTGTC GCCCGAGGGC
GGCGAGGTGG TGGTTGCCAT GCGGCAACTG GGCGGTGACC CGGTGCTCGA CGACGAGGCC
AGGGCTCGAT ACAAGCAGCG CCTGGACGAC CTCGACGACG AGATCGACCG GGCGGCGGCA
CGTGGCGACA CGCGCCGGCT CGCCGAGTAC GACGGCGAGC GGCGGGCGCT GCTCGCCGAG
TTGCGGGCCG CCGCGGGGCT GGCGGGACGT ACCCGCCGCC TCGGCGACGA GTCCGAGCGT
GCCCGCAAGA CCGTGACCGC GCGCATCCGC GACACGCTGC GCAAGCTCGA CGACAGACAT
CCCGAACTCG CTGCCCACCT GCGCAGTGCC GTGACCACCG GTTCGACCTG CCGCTACCAA
CCAGCGTCTG AGGTGGCCTG GGTCCTGTGA
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| Protein sequence | MRGGIDRVIN SHGGLVLVTG EAGIGKTALV TWAANEARRS GALVLSGSCW DSESAPGYWP
WVQVIRGLRR NMSEQEWRAA DRVAGGGLAV LFGERPGDAP DGFQLYDAVT TALVSASQRC
PVVVVLDDLH WADAASLRLL EFAAQHTWFE RLLLVGTYRD VEMEQIAHPM RPLLLPLVAR
ATTVTLTGLG PEDVHTLMAR TGDAELDPAL VAEVHQRTGG NPFFVEQTAR LWHSGGSVAV
IPPGVRDAVR RRLSLLPGPV ERLLSTAAVL GREFHRQLLA AVAASPVPHV DRLLDQAATT
RLVVAKGAGR FAFTHDLVRE TLYEEVADVG RQHAAVVRAI DDVPALAQRV IPADLAHHAY
LAGEHLDPAR AVELLVAAAR AATGRLATEE ATGHYRRALD RARGGGSCLH VVAALDLGEH
LHQMGDIDGA WQIFDEAVAR AREHGDPQLL ARVALTLHEA AGRDTIDHST TELLDLAHAA
LVRDGAPAEE PMSTDRLTHE LVTHLSASVR GGDDDALAFS LWARYHTVWG LGTAAARVTL
ADEMTDVGHQ VGDPQLEHFG ASLRWVTLLE LGDPGYLEKY DAFVAQAERD GMPLGTFASD
VDQSIISTFS GRFAQAEALL DRAVDAVEED QFASFGYKAD HLRWATWLLQ GRYEGLDDLH
RTAADRGHPH PRLLAGISAI EQGDVAAALE HLQAAPGPYP REYAPLGVRF RAQVAAATRD
RQLCTRVRAE LAPYRGQWLV SLYGWDISGP VDHWIALVDA ALEQWTDAIT GFTVARESAG
RLRARPWAIE AGVQLAGAML ARDGATDAAA ALLDDVRREA AEIGMRHIGA RVDRVGGARP
GSTRSPALAG EFRRDGAVWL LGFGGRTVHM PATKGLNDLR LLLSRPGVDM PAVRLLSPEG
GEVVVAMRQL GGDPVLDDEA RARYKQRLDD LDDEIDRAAA RGDTRRLAEY DGERRALLAE
LRAAAGLAGR TRRLGDESER ARKTVTARIR DTLRKLDDRH PELAAHLRSA VTTGSTCRYQ
PASEVAWVL
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