| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4931 |
|---|
| Symbol | |
|---|
| ID | 5707078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 5596493 |
|---|
| End bp | 5597404 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641274327 |
|---|
| Product | squalene/phytoene synthase |
|---|
| Protein accession | YP_001539669 |
|---|
| Protein GI | 159040416 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1562] Phytoene/squalene synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.974749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.56653 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACACTG ATCTCACCGC CGCCTACAAC CGATGCCGTG AGCTGCACCG ACAGCACGGC
CACACCTACT ATCTCGCCAC TCGTCTGCTT CCCGCCTGGA AACGGCGACA TGTGCATGCG
TTGTACGGTT TCACCCGGTA CGCGGACGAG ATCGTCGACC GCACCGAGGA CCTGCCACCG
CCGCGCCGGG CTGCCCGGCT GGACGACTGG GCCGGGCGAT TCGTCGCCGG CCTGCACGGC
GAGCCGGTCG ACGACCCACT GCTACCCGCC GTGCTGCACA CCATCGCCGT CTTCGACCTG
AACCGAGACG ACTTCGCGTC GTTTCTCGGC AGCATGGCGA TGGATCTGAC CGTCAGCTCC
TACCGCACCT ACGGTGACCT GCTCGACTAC ATGGAGGGCT CCGCCGCGGT CATCGGCACG
ATGATGCTGC CGATCCTCGG CAGCATCGAC CCGGCCGCGG CGCGCGAGCC CGCCCGCCAG
CTCGGCTTCG CCTTCCAGCT GACGAACTTC ATCCGGGACG TCGCCGAGGA CCTCGACCGC
GGTCGGACAT ACCTGCCCGA CGAGGACCTG ACCCGCTTCG GCGTCACCCG CGACGACCTG
CTGGCCGCCC GCGCCGCCGG CCGGACCAGC GAGCCGGTCC GGGAACTGAT CCGCTACGAG
GTGGCGCGCG CCCAGGCACA CTACGCCGCC GCCGCGCCCG GGGTCACCCT GCTCGACCCT
GCCTCCCAGA CCTGCATCCG TACCGCGTAC GCGCTCTACG GGGACATCCT CGACGAGGTC
GCCGCACAGG ACTTCGACGT CTTCGCCCGA CGGGCCCGGG TACCGCCGCG CCAGCGGCTG
GCGGAGGCCG CCCGTGCCCT GCTCGCCCGG CCCGGCACCC CCGTCCGAGT GCCCGGCCCG
GCACTGCGGT AG
|
|---|
| Protein sequence | MDTDLTAAYN RCRELHRQHG HTYYLATRLL PAWKRRHVHA LYGFTRYADE IVDRTEDLPP
PRRAARLDDW AGRFVAGLHG EPVDDPLLPA VLHTIAVFDL NRDDFASFLG SMAMDLTVSS
YRTYGDLLDY MEGSAAVIGT MMLPILGSID PAAAREPARQ LGFAFQLTNF IRDVAEDLDR
GRTYLPDEDL TRFGVTRDDL LAARAAGRTS EPVRELIRYE VARAQAHYAA AAPGVTLLDP
ASQTCIRTAY ALYGDILDEV AAQDFDVFAR RARVPPRQRL AEAARALLAR PGTPVRVPGP
ALR
|
|---|
| |