Gene Sare_4929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4929 
Symbol 
ID5707076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5593767 
End bp5595245 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content70% 
IMG OID641274325 
Productzeta-phytoene desaturase 
Protein accessionYP_001539667 
Protein GI159040414 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID[TIGR02734] phytoene desaturase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.258823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.799895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTACCG TGCCCGGGCG TACGGACCGG GTCGTGGTCG TTGGTGCGGG GCTCGGCGGG 
CTGGCCTGCG CACTGCACCT GGCCGGCAGC GGCCGACAGG TGACGGTACT GGAACGGGAA
CCGGTGCCGG GCGGCCGGGC CGGTCGGCTC AGCGTCGACG GATACGAGTT CGACACCGGC
CCCACGGTGC TGACCATGCC GGAGCTGATC GCCGAGGCGC TCCACGCGGT CGGCGAGGAA
CTGGACGACT GGCTCGAACT GTCCCCACTC GACCCCGCCT ACCGGGCGTA CTATCCGGAC
GGCTCCACGC TCGACGTCAT CACCGACACG GCTCGGATGG CTGCCGAGGT CGCGAAGGTC
TGCGGCCCCC GCGAGGCCGA CGGCTACCTG CGTTTCGTCG ACTACGCCCG GAAGCTGTGG
CAGCTGGAGC GGGCCGACTT CATCGAACGC AACCTGGACG CACCGGCTGA CCTGCTCACC
GGGAACCTGC TGAAGCTACT CGCCGGCGGT GCCTTCCGCC GACTCCAAAC GAAGATCAAC
CAGTTCTTCC GGGATCCACG CACCCAGCGC GTCTTCTCCT TCCAGGCCAT GTATGCCGGG
CTCGCGCCGC ACGACGCGCT CGCCATCTAC GCGGTCATCG CCTACCTCGA CTCGGTCGCC
GGGGTGTACT TCCCGCGAGG CGGCATCCAC GCTGTCTCGC GGGCCATGGC CGGCGCCGCC
GAGAAGCACG GAGTGCAGCT GCGGTACGAC ACCACCGTGA CCCGAGTCGA GACCGCAGCC
GGTCGGGCGA CGGGCGTCCG GACCACCAGC GGCGAGTTCG TTCCCGCTGA CGTGGTGGTG
CTCAACCCGG ACCTGCCGGT GGCCCACCGT GACCTGCTCC GGACCCGGCA CCGCCGGTTG
ACCTATTCGC CGTCCTGCGT GGTCCTGCAT GTCGGGTCCA CGCAGCGCTA TGCGAAGATC
GCTCACCACA ACATCCACTT CGGGCGGGCA TGGCGGGGTA CCTTCGACGA GGTCATCCGC
CGAGGTGAGC TGATGAGTGA CCCGTCGCTG CTGGTCACCA ACCCGAGTCG GACGGATCGA
TCAGTGGCTC CCGCCGGCCG GCACGCCTAC TACGTGCTGG CACCGGTACC CAACCTCGAC
CGGGGGCCGT TCGACTGGCA GGGCGGGCTG GCCGGCCGCT ACGCCGATCA ACTGGTGCAG
ACGCTGGAGG AGCGTGGCTA CGTGGACTTC GGAGACGGCA TCGAGGTGCT GCGGACGGTT
ACTCCCGCCG AGTGGGCGGA GCAGGGCATG GCCGCCGGTA CACCGTTCGC GTCCGCGCAC
AACCTCTTGC AGACCGGCCC GTTCCGCCCG CCAACGCTGC ACCGCGGATA CCCGAACGTG
GTCTTCGTCG GCTCGGGTAC CCAGCCCGGA GTCGGGGTGC CGATGGTGCT GATCTCCGGC
AAGATCGCTG CCGCGCGGGT GACGGGAGTC CGCTCGTGA
 
Protein sequence
MRTVPGRTDR VVVVGAGLGG LACALHLAGS GRQVTVLERE PVPGGRAGRL SVDGYEFDTG 
PTVLTMPELI AEALHAVGEE LDDWLELSPL DPAYRAYYPD GSTLDVITDT ARMAAEVAKV
CGPREADGYL RFVDYARKLW QLERADFIER NLDAPADLLT GNLLKLLAGG AFRRLQTKIN
QFFRDPRTQR VFSFQAMYAG LAPHDALAIY AVIAYLDSVA GVYFPRGGIH AVSRAMAGAA
EKHGVQLRYD TTVTRVETAA GRATGVRTTS GEFVPADVVV LNPDLPVAHR DLLRTRHRRL
TYSPSCVVLH VGSTQRYAKI AHHNIHFGRA WRGTFDEVIR RGELMSDPSL LVTNPSRTDR
SVAPAGRHAY YVLAPVPNLD RGPFDWQGGL AGRYADQLVQ TLEERGYVDF GDGIEVLRTV
TPAEWAEQGM AAGTPFASAH NLLQTGPFRP PTLHRGYPNV VFVGSGTQPG VGVPMVLISG
KIAAARVTGV RS