Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4913 |
Symbol | |
ID | 5707401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5580392 |
End bp | 5581153 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641274307 |
Product | putative DNA-binding protein |
Protein accession | YP_001539652 |
Protein GI | 159040399 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0335747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATCC CCAACACTGC GCTCAGAGCC GTCCGTGCAG GCATGCGCAT GAGCCAAGAC GACTTCGCCC GAGCACTCCA AGCCGCCGGA CACCGGGCCG GAGAACCGAA CGACGCCAAC AAGCGGCTTG TGCAGCGGTG GGAGTCAGGC ACGATCGCTG CTCCCAGGCC CATCTACGTT CGCGCCCTGG AGGTCGTTAC TGGCCTACCA ATCGAGCTGC TCGGCTTTGC GAACCTGCCG GGCACGCACG TCAGCGGTGA CCACAAGGGG GGACACGACC TGACGTCATC GATATCTGAC CTGGCCACCC CCGAACCAAT GGCCCGCCTG GGATCCCCGC ATGGCTCCTA CGTGGGCGTG TGGCTCAGCC GCTACCAGTA CTACTCAAGC GGTCGGGGCG AGTCCTACGC AGGGCAGCAC TACGTGGTGC TGTTGCAGCA CAGCGACCGG CTGACTGTGC GCAGTCTTCC CAACTCCGCC GCATCGGCGC TGTCGCTCGA CCTCACCGTG GACGGCAGCG TCATCACCGG GACGTGGACC GAGCAGACCG CCCAGGAGGG CTACTACCGG GGCGCCTGCT ATCACGGAGC AATTCAGATG CTCGTCGAGC CGACGGGTCG GCGCATGGCA GGCAAGTGGG TCGGCTTCGG CAAGGACATG GATATCAATA CAGGTCCCTG GGAACTGGTG TTTCAGGATG GTTCGACCAA GAAGTCGACC CTGGACCGTT ACAACACTCC ACCGCGCGAC CTTTCCGAGT AA
|
Protein sequence | MTIPNTALRA VRAGMRMSQD DFARALQAAG HRAGEPNDAN KRLVQRWESG TIAAPRPIYV RALEVVTGLP IELLGFANLP GTHVSGDHKG GHDLTSSISD LATPEPMARL GSPHGSYVGV WLSRYQYYSS GRGESYAGQH YVVLLQHSDR LTVRSLPNSA ASALSLDLTV DGSVITGTWT EQTAQEGYYR GACYHGAIQM LVEPTGRRMA GKWVGFGKDM DINTGPWELV FQDGSTKKST LDRYNTPPRD LSE
|
| |