Gene Sare_4901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4901 
Symbol 
ID5707417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5567759 
End bp5568562 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content67% 
IMG OID641274296 
ProductXRE family transcriptional regulator 
Protein accessionYP_001539641 
Protein GI159040388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000244181 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGTAA CGAGACCCGC CATCGGGGTG ATGCTGCGGG ACTGGCGTCG GCGGCGACGA 
CTCAGCCAAC TTGAGCTGTC CATCCAGGCG GACATCTCCA CCCGGCACCT CAGCTTCCTC
GAGACCGGCC GCTCGACGCC GAGCCGGGAT ATGGTGCTGC AGCTGGCCGA CCGGCTGGAC
CTGGCGTTAC GGGAGCGGAA CCGGCTGCTG TTGGCTGCCG GGTATGCGCC GGTCTATTCG
GAGACACCGC TGGACGCTCC GCCCATGACC GCTGTTCGCT CCGCCATTCG TCAGGTGCTC
GGCGGGCACG AACCGTATCC CGCCGTGGTC GTCGACCGTG CCTGGAATCT GGTCGACGCC
AACGAGAGCC TGTCTGTGCT CACCGATCTG GTGGCACCCC GGCTGCTGGT ACCGCCAGCG
AACGTCCTCC GGGTGAGCCT GCATCCGGAA GGGCTGGCAC CGCACATCGT GAACCTCGAT
GAGTGGCGGG GGCACCTGCT GCATCGGCTC AGCCGGCAGG TGGAGTTCAG CGGTGACCCG
GAACTGGCTG ATCTCGAGGA GGAACTACGT GGCTATCCGG GTGGCGAGAC CCATGCCACC
GGCTCGGCCG TCGACGGCAT CGTGGTACCG GTGCGGGTAC GACGGGACTG CCGCGTGCTC
AACCTGTTCA CCACCGTGGC GACCTTCGGT ACGCCGTTGG ATATCACCCT CTCCGAGCTG
TCGATCGAGT CGTTCTACCC AGCTGATGAG GTAACCGCGC GAGAGCTGCG GAATCGGCGA
ACGCCCTCCG CCCGAACTGC GTGA
 
Protein sequence
MTVTRPAIGV MLRDWRRRRR LSQLELSIQA DISTRHLSFL ETGRSTPSRD MVLQLADRLD 
LALRERNRLL LAAGYAPVYS ETPLDAPPMT AVRSAIRQVL GGHEPYPAVV VDRAWNLVDA
NESLSVLTDL VAPRLLVPPA NVLRVSLHPE GLAPHIVNLD EWRGHLLHRL SRQVEFSGDP
ELADLEEELR GYPGGETHAT GSAVDGIVVP VRVRRDCRVL NLFTTVATFG TPLDITLSEL
SIESFYPADE VTARELRNRR TPSARTA