Gene Sare_4900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4900 
Symbol 
ID5707416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5566694 
End bp5567590 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content65% 
IMG OID641274295 
Productalpha/beta hydrolase fold 
Protein accessionYP_001539640 
Protein GI159040387 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000488276 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTCTGGAT TCACCGCCAC GCAGGCAGCC GACCTCTTCC GTGCCCGGCC AGATCGCTTC 
GTCGACGTGG GACATGGACA GGTCGCGGTT CGCAGTGTCG GGGAGGGGCC AGACGTGCTC
CTCGTGCACG GATGGCCAGT CAGTGGTGCC ACGTTCCGCA CCCTCCTTCC CTATCTTGTC
CCACACTTTC GATGCCACGT CCTCGACCTC GTGGGTGCCG GTGACAGTCG CTTCGACCGG
ACCGCCCGCG TCGACATCAC CGCCCACGCG GAAGCGGTAC GACGGGTCGT GGACGCTCTC
GCCCTGGACG ACGTCGCGGT CGTCGGTCAT GACAGTGGCG GGCTCATCGC ACGATTCGCT
CTGGCCGGGA ACCCTGGCGT CCGTTCCTGG GGGCTGATCG ACACCGAGCA GTCTCAGGGC
CCCCACTGGC GCCTGTCGTT GTTGCTTGCC ACCCGTCACA TACCAAAATT CGAGCGGCTG
CTCACCACGG CGCTGAACAG TACGCTACTG CGCCGGAACC GGTTCGTCCT CGGCGACGCC
TTCCGCGACC GTTCCCTGCT TGGTGGAGAG TTCGAGGAGT TCTTCCTCAG ACCACTCAGG
GACAGTGCCG ACCGGCGCTG GGCCTTCGGG CAAGCGGCCC GCAGGTTTGA CTTCGCTGCT
TTTGATGCGC TTGCCGGTCT TCATGCCCGT ATCACGGTGC CCGTTCAACT GATCTGGGGT
GCCGACGACC CCTTCTTCCC GGTGTCCTGG ACGCGCGAGA TGATGTCCGG CTTCGGGGGC
ACCGTTCGAC TTCACGAAGT CGGTGGTGGC AAGCTCTTCG TCCACGAGGA GTTCGCGGAG
GAGGTTGCCA ACGCGCTCAT TCCTACGCTG GCCGTGCCCC GCGGAGCTCG GAAGTGA
 
Protein sequence
MSGFTATQAA DLFRARPDRF VDVGHGQVAV RSVGEGPDVL LVHGWPVSGA TFRTLLPYLV 
PHFRCHVLDL VGAGDSRFDR TARVDITAHA EAVRRVVDAL ALDDVAVVGH DSGGLIARFA
LAGNPGVRSW GLIDTEQSQG PHWRLSLLLA TRHIPKFERL LTTALNSTLL RRNRFVLGDA
FRDRSLLGGE FEEFFLRPLR DSADRRWAFG QAARRFDFAA FDALAGLHAR ITVPVQLIWG
ADDPFFPVSW TREMMSGFGG TVRLHEVGGG KLFVHEEFAE EVANALIPTL AVPRGARK