Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4900 |
Symbol | |
ID | 5707416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5566694 |
End bp | 5567590 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641274295 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001539640 |
Protein GI | 159040387 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000488276 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GTGTCTGGAT TCACCGCCAC GCAGGCAGCC GACCTCTTCC GTGCCCGGCC AGATCGCTTC GTCGACGTGG GACATGGACA GGTCGCGGTT CGCAGTGTCG GGGAGGGGCC AGACGTGCTC CTCGTGCACG GATGGCCAGT CAGTGGTGCC ACGTTCCGCA CCCTCCTTCC CTATCTTGTC CCACACTTTC GATGCCACGT CCTCGACCTC GTGGGTGCCG GTGACAGTCG CTTCGACCGG ACCGCCCGCG TCGACATCAC CGCCCACGCG GAAGCGGTAC GACGGGTCGT GGACGCTCTC GCCCTGGACG ACGTCGCGGT CGTCGGTCAT GACAGTGGCG GGCTCATCGC ACGATTCGCT CTGGCCGGGA ACCCTGGCGT CCGTTCCTGG GGGCTGATCG ACACCGAGCA GTCTCAGGGC CCCCACTGGC GCCTGTCGTT GTTGCTTGCC ACCCGTCACA TACCAAAATT CGAGCGGCTG CTCACCACGG CGCTGAACAG TACGCTACTG CGCCGGAACC GGTTCGTCCT CGGCGACGCC TTCCGCGACC GTTCCCTGCT TGGTGGAGAG TTCGAGGAGT TCTTCCTCAG ACCACTCAGG GACAGTGCCG ACCGGCGCTG GGCCTTCGGG CAAGCGGCCC GCAGGTTTGA CTTCGCTGCT TTTGATGCGC TTGCCGGTCT TCATGCCCGT ATCACGGTGC CCGTTCAACT GATCTGGGGT GCCGACGACC CCTTCTTCCC GGTGTCCTGG ACGCGCGAGA TGATGTCCGG CTTCGGGGGC ACCGTTCGAC TTCACGAAGT CGGTGGTGGC AAGCTCTTCG TCCACGAGGA GTTCGCGGAG GAGGTTGCCA ACGCGCTCAT TCCTACGCTG GCCGTGCCCC GCGGAGCTCG GAAGTGA
|
Protein sequence | MSGFTATQAA DLFRARPDRF VDVGHGQVAV RSVGEGPDVL LVHGWPVSGA TFRTLLPYLV PHFRCHVLDL VGAGDSRFDR TARVDITAHA EAVRRVVDAL ALDDVAVVGH DSGGLIARFA LAGNPGVRSW GLIDTEQSQG PHWRLSLLLA TRHIPKFERL LTTALNSTLL RRNRFVLGDA FRDRSLLGGE FEEFFLRPLR DSADRRWAFG QAARRFDFAA FDALAGLHAR ITVPVQLIWG ADDPFFPVSW TREMMSGFGG TVRLHEVGGG KLFVHEEFAE EVANALIPTL AVPRGARK
|
| |