Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4858 |
Symbol | |
ID | 5707597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5514087 |
End bp | 5514887 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641274254 |
Product | chitin-binding domain-containing protein |
Protein accession | YP_001539599 |
Protein GI | 159040346 |
COG category | [S] Function unknown |
COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.667508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0771656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATTC GCAAACTCAT CGCCTACCCT CTGACAGCCG TCGCGGCCGC GGCCGGCTCG ACACTGGCAT TCGCGTCGCC CGCCTCGGCA CACGGGTACG TGGCCTCGCC GCCGAGCCGG CAGGCGCTGT GCGCGCAACG CGCCGTCCCG GACTGCGGCC CGATCAAGTA CGAGCCGCAG AGTGTGGAGG GGCCGAAAGG CCTCAAACGC TGTGACGGCG GGCTTTCCCA GTTCGCCGTG CTGAACGACA ACAACCGCGG CTGGCCGGCC CGGGAGGTGG GCGACACCGT CACCTTCAGC TGGACCCTGA CGGCTCGGCA TCGCACCAGC ACGTGGGAGT ACTTCATCGG CGACACCCGG ATCGCCCAGT TCGACGGTGG TAACCGGCAG CCCGAGGCGG TCGTCACCCA CCGGGTCGAT CTGAGTGACT TCGCGGGCCC GCAGACGGTA CTGGCGATTT GGAACATCGG CGACACACCG ATGGCCTTCT ACAACTGCAT CGACCTCGAC GTGAAGGGTG GAGGTACCAC CCCGCCGACC CAGTCGCCGA CTCCCGAACC CACCAGCAAG CCGACGCAGA AACCGACCGG CCAGCCCACA TCGACTGCCC TGCCCACCAA TCCGGGGACG CCAGGTCAGA CCGGTGGGCC GACCGCCGAA GCCTGGGCAG CGGGTACCGC CTACCGGGTC GGCGACGAGG TCACCTTCGG CGGAGAACGC TACCGTTGCC GGCAGGCTCA CACCGCGATT CGTAGCTGGG AGCCGTCGCT GTTCACGCTC GCCCTGTGGC TGCCGGTATG A
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Protein sequence | MNIRKLIAYP LTAVAAAAGS TLAFASPASA HGYVASPPSR QALCAQRAVP DCGPIKYEPQ SVEGPKGLKR CDGGLSQFAV LNDNNRGWPA REVGDTVTFS WTLTARHRTS TWEYFIGDTR IAQFDGGNRQ PEAVVTHRVD LSDFAGPQTV LAIWNIGDTP MAFYNCIDLD VKGGGTTPPT QSPTPEPTSK PTQKPTGQPT STALPTNPGT PGQTGGPTAE AWAAGTAYRV GDEVTFGGER YRCRQAHTAI RSWEPSLFTL ALWLPV
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