Gene Sare_4848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4848 
Symbol 
ID5707627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5503628 
End bp5503936 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content69% 
IMG OID641274244 
Productphosphotransferase system lactose/cellobiose-specific IIB subunit 
Protein accessionYP_001539589 
Protein GI159040336 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2213] Phosphotransferase system, mannitol-specific IIBC component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00818505 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACCA TCAACGGCTC CACCGTCCGC AAGGTCGTCA TCGCCTGCGA CGCCGGCATG 
GGCAGCAGCG CGATGCTCGC CGGCCAGCTA CGCCGCCAAC TCGGCAAACA CTCGGTGGCC
GTCGAGCACA CACCGGTCGA CGCCATTCCC GCCGACGCGG ACGTGGTGAT CTGCCACCAG
GGCCTCGCCG AGCGGGCCCG GATCAGCGCC CCGGACACGA TCATCGTGCC GATCCAGGTC
TTCATCGGCG ATCCGGCGGT GACCCGAGTC GTCAAGGCCG TGCAGACCGG CGGCGACATC
GATGGATGA
 
Protein sequence
MTTINGSTVR KVVIACDAGM GSSAMLAGQL RRQLGKHSVA VEHTPVDAIP ADADVVICHQ 
GLAERARISA PDTIIVPIQV FIGDPAVTRV VKAVQTGGDI DG