Gene Sare_4845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4845 
Symbol 
ID5707624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5501799 
End bp5502089 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content71% 
IMG OID641274241 
Productphosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_001539586 
Protein GI159040333 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.778236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00884178 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCACCC GTACCGTTAC GGTCGGTGCG ACCAGTGGCC TGCACGCCCG GCCCGCCGCC 
CTGTTCGTCG CTGCCGCCGC GGCTCAATCT GTCCCGGTTA CCATCCGGAC CAGCGACAAG
CCTCCCGTCC CTGCCCGCAG CCTGCTGTCC GTGCTGGCCC TGGGCGCCAA GCACGGCACC
GAGGTCACCC TCGAAGCTGA CGGTCCCACG GCCGACGCCG CCCTCGACGC GCTCGCCACG
CTGCTCGCCC GTGACCTCGA CTCCGATGAC GAGTCACCGG ACCATGGCTG A
 
Protein sequence
MPTRTVTVGA TSGLHARPAA LFVAAAAAQS VPVTIRTSDK PPVPARSLLS VLALGAKHGT 
EVTLEADGPT ADAALDALAT LLARDLDSDD ESPDHG