| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4843 |
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| Symbol | |
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| ID | 5707622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 5496603 |
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| End bp | 5500058 |
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| Gene Length | 3456 bp |
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| Protein Length | 1151 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641274239 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_001539584 |
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| Protein GI | 159040331 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0675424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00881271 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCAACGA CACTTGATCA TCGGCTTCGT GTCTCGGTCC TGGGCTCCGT GCGGGCCTGG
CTCGGCGAAC ACGAGCTGCC CCTCGGACCG GCCCGGCAGC GGGCACTCTT CGCGGTGCTG
GCAGCCGCCG CCGGCCGTCC CGTCGGCCGC GACGAGCTGA TCGAGGGAAT CTGGGGCACC
TCGCCGCCGG CTACCGCGGC CGGCAGTGTC TACACCTACG TCTCCGGGCT TCGGCGTAGT
CTGGCGACGC CGGGCCTACC CCGATCGAGT CACCACCTCC TCACCTCCGG CCCGTCGGGC
TACGCCCTGC GGCTGTCCCC CGAGGACCTG GACAGCGAAC GCTTTCTGGC TTTCTGCCAC
CAGGCTCAGG AACTGCGGGA GGCCGATCCA CAGGCTGCGG CCACCCGCTG GGACGAGGCA
CTGGCGTTGT GGCACGGGGA GGCGTACGCC GGAGTCTCCG GTCCCCGGAT CGAGACGGAA
CGTACCCGGC TGGCCGAGCG TCGCCTCACC GCGACCGAAC AGCGGGCACG ACTGGGCCTG
CACCTCGGCG ACGACGACCT GCTGGCCACA CTGTCCGGCC TGGTGCACGA GAACCCGCTG
CACGAGCCCC TGTACGAGCT GCTGATGCTC GCCCTGCACC GGATCGGCCG CCGTACCGCG
GCGATCGAGG TGTTCCGGGC CGCTCGGCAC ACCCTCCTCG CCGAGCTCGG TGTCGGGCCC
GGCCCGGCGC TGACCGAGTT GCACCGACGG CTACTGGCCG AGCCGGCCGC CCCCGCCATC
CCCGCCACCC GCCCCACACC ACCGATCCTG CCATCAGAGA TCAGCAGCGC GGCGTGCGAC
GGTCAGGCGC GGGTGCTGGC GGGGCGCGAC GACGAACTGA CGATGCTGCG CATCCTGGTT
CGGGCGGTCG TAGCGGGCCA CGGAACCGCG CTGTGGATCG AGGGTGAGCC GGGCATCGGC
AAGACGGAAC TACTCACCGC CGCCATCGCC GACGCGAACG GCCTGGGCTG CCAGATCGCG
TGGGGCGCCG CCGACGAACT GGACCAGGAC GCCCCGCTGC AGGTGATCTG GCGGGCGTTG
GGCGTGCGGG CGACCTCGGA GTGGCATCGG CCCCCGAACC CGGCGGCCGC CGCGGAACGC
CTGCTCGCAC ACGTGCGGGC GAGCTGCGAG ACCGGGCCCC TTGTGCTCGT CGTCGACAAC
TTTCAGTGGG TGGACGAGGT CAGCTGCCTG CTCTGGGACC GGCTGATCGC CGCCACGCGA
CGCATGCCGC TGTTGCTTGT CGCGGCGACC CGACTCGGGT CGTACGGCCA CGCACTAGCC
CAGCTACGCC GCAGCGTCCA GGCCCGGGAG GGCCACGTAC TGCGTCTGCG TGCGCTGCCG
CCAGCGGCGA TCGAGCAGTT GGTGGCCCAG TTGGTCGGGG CTCCGGTGGG GCCGTACCTG
GCGGCGGTCG TGCCGCGGCT GGGCGGAAAC CCGCTCGGTG CCCGTGAGGT GATCACGGCC
TTGGTCCGTC GTGGGGCGGT GCGGATCAGT GACGGGTGTG CCGACATCGA CACGTCCGTG
CCAGTGGAGG CTCCCCGCTC ACTGCTGGTC GTGATCCGGG CCATCGTGGA CCTTCTCTCA
CCCGCCACCC AGGAGGTCCT ACGAACGGCG GCGCTACTTG GCCCGGAGTT CAGCGGCGAC
GACATCGTCG CGGTCACCGG ACGGTCACCA GTCGACCTGG TGGCAAACCT GGAGGAGGCA
CTCGCTGCCC ACATCGTCGT GGAAGCGGGC AGCGTGCTCG CCTTTCGTCA CCCACTCGTG
CGGCGAATGC TCTACGAGGG TATCCCGGCG CCGGCGCGAG CGGCGTTGCA CCGGCACACG
GCCGAGGTGC TGCACCGTGG CGGCGGTTCG GCGACCCGGG TGGCCGAGCA ACTCGCCGCC
GGTGAGCCCC CGGTCGACGA GTGGATGGTG TCCTGGCTCG TCGAGCGGCA CGCCGAGGTG
ACCAAGCGGG CGCCGCAGGT CGCCGGCCAC CTGCTGCGGC GGGTGCTCGA CACGGATGTA
CCCAGCACGA CACAGCGCGC GGTGTTGCTC ATCGCCCTGG TCAGACTGGA CTTCCGGCAC
CAGCGGTGGT CGATGGCCGA GGCGCGCGAG GCCGCCGGGC TGGCGCGGGA TCCGGCCGAT
CGTGCGGAGA TGCGTCACCT GCTCGCCACC ATGGCCTTCC GTCGTGGCGA CGCCGTGGCC
GCGACCAGCC TGCTCGAGGC GTCGCTGTGC GATCCGGAGG CGCCCGAGCT CTGGCGGACG
AGCCACCATG TGCTGCTGGC CACCTTTCGG CGGGGCAGCC TCGACGATCT CGACAGCGCC
GATCGGACGG CCGGGTGCAC CCACAGCGAG GCAGTCGCGG CGGGACAGCC GTACGAGGCC
GCGTTCGCGT TGCAGACCGT GTGGCTGACC AACTCGATCC GGCGCGACCA CGAACGTGCG
CTGGAGTACG TCGACCAAGC GTTGGACACC GTTCGGGGCC GTCGGGCGTG CGTGGGCATG
TACCTTGACC TGCTCGACAA CCGGACGTTC ACCCTGCAGA ACCTCGACCG GCTCGACGAG
GCCGAACGGA CCCTGCGCGA GGCGGCGCTC GTCGCCCTCC GACACCGGCT TCCACACGGC
CTACCGGTGG CCACGGCGGT CCAGCACTAC TGGCTTGGCC GCTGGGACGA CGCCCTGACA
ACGCTCAGCG CGGTCAGGGC GGTCGCCGAT GACAATCCCG GCATCACGTT CCTGGGAAAC
CGTGAACCGG GTGCCGTCAC CATGCTGCTG CACGGTGTCG CCGCGCTGAT CGCCGCACAC
CACGACGACG CTGGCCTGGT CGCCGAGCAC CTGGCGGCGG TGCACGCGCT GCCCGCCACC
GATGCCGAGC GGGCGAGTAG CGACTTCCTG CTGGTCGCCC GCTCGTTGGT CGCCGAGCAG
CAGGGCCGGG CCGACGAGGC ACTCGACGTC CTCGCCCCCC TGCTGGCACC GTCGTACGCG
CCGATGATGC TGCGTCACCA GTGGCTTCCG GGCGTGGTGC GGCTCGCCCT CGACCAGCGC
CGTACCGACG TCGTCGAATG GGCGGTGGAG ATCTGCGCGG GTGAGGCGAA CAAGGAGGTC
CGGCCCGCTC GAGCAGATGC CGCCGCCCAG CGTTGTCGGG CGCTGATCAC GGGGGATCCG
GAACCCGCCC TGGCTGCGGC GGCCCGCTAC CGCAGGGTGG GTCGGGCGCC GGAACTGGCG
GCGGCGCTCG AGGACGCAGC GGTGCTGCTC GCCGCCGATC GTCGCCCGCA CGAGGCGATC
CGGGTGTGCG GCGAGGCGGT ATCGCTGTAT TCGGCGCTCG GCGCCCGGTG GGATCTGCGC
CGGATCCGCC GCCGGCTCGC TGAGTTCGGG GTGGATCGGT CCCGCGAAGC GGTGTCCGTG
GATCGGCGGT CCGTCGCTGT CCTCAGTGCA GGGTGA
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| Protein sequence | MSTTLDHRLR VSVLGSVRAW LGEHELPLGP ARQRALFAVL AAAAGRPVGR DELIEGIWGT
SPPATAAGSV YTYVSGLRRS LATPGLPRSS HHLLTSGPSG YALRLSPEDL DSERFLAFCH
QAQELREADP QAAATRWDEA LALWHGEAYA GVSGPRIETE RTRLAERRLT ATEQRARLGL
HLGDDDLLAT LSGLVHENPL HEPLYELLML ALHRIGRRTA AIEVFRAARH TLLAELGVGP
GPALTELHRR LLAEPAAPAI PATRPTPPIL PSEISSAACD GQARVLAGRD DELTMLRILV
RAVVAGHGTA LWIEGEPGIG KTELLTAAIA DANGLGCQIA WGAADELDQD APLQVIWRAL
GVRATSEWHR PPNPAAAAER LLAHVRASCE TGPLVLVVDN FQWVDEVSCL LWDRLIAATR
RMPLLLVAAT RLGSYGHALA QLRRSVQARE GHVLRLRALP PAAIEQLVAQ LVGAPVGPYL
AAVVPRLGGN PLGAREVITA LVRRGAVRIS DGCADIDTSV PVEAPRSLLV VIRAIVDLLS
PATQEVLRTA ALLGPEFSGD DIVAVTGRSP VDLVANLEEA LAAHIVVEAG SVLAFRHPLV
RRMLYEGIPA PARAALHRHT AEVLHRGGGS ATRVAEQLAA GEPPVDEWMV SWLVERHAEV
TKRAPQVAGH LLRRVLDTDV PSTTQRAVLL IALVRLDFRH QRWSMAEARE AAGLARDPAD
RAEMRHLLAT MAFRRGDAVA ATSLLEASLC DPEAPELWRT SHHVLLATFR RGSLDDLDSA
DRTAGCTHSE AVAAGQPYEA AFALQTVWLT NSIRRDHERA LEYVDQALDT VRGRRACVGM
YLDLLDNRTF TLQNLDRLDE AERTLREAAL VALRHRLPHG LPVATAVQHY WLGRWDDALT
TLSAVRAVAD DNPGITFLGN REPGAVTMLL HGVAALIAAH HDDAGLVAEH LAAVHALPAT
DAERASSDFL LVARSLVAEQ QGRADEALDV LAPLLAPSYA PMMLRHQWLP GVVRLALDQR
RTDVVEWAVE ICAGEANKEV RPARADAAAQ RCRALITGDP EPALAAAARY RRVGRAPELA
AALEDAAVLL AADRRPHEAI RVCGEAVSLY SALGARWDLR RIRRRLAEFG VDRSREAVSV
DRRSVAVLSA G
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