Gene Sare_4814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4814 
Symbol 
ID5707935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5443874 
End bp5444539 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID641274210 
ProductHAD family hydrolase 
Protein accessionYP_001539555 
Protein GI159040302 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC GCGCGGCGGT GCCGGACGGC GAGACCTTCG GGGCTCTGAT CTTCGACTGG 
GACGGCACCC TGGTGGACTC CAACGACGTC TGCTTCACGG CCCTGGCGCG TGCGATGGCA
GACGCGGGAG CAAAGCTGGA TCCGGACTGG TACTGGCCGC GGCAGGCGAT AACGTCGCCC
GACATGCTGC TCGCGTGGGA GCAGGAGTTC GGCCATCTGC CGGAACCGGT CGACGACATC
ATTCGCAGGT GCCGCGGGTA CGTTCGGGCT GCGGCTCCCA ACCTCAGAGT CATCGATGAC
GTGGCCCTGG TTGCGCGCAC GGCACGGCAG CGCGGCCAGC GGCTCGGTAT CGGCTCGAAC
TCGTCCGGGA GTGTCGTGGC TGCCGGGCTC GAAGCCACAG GACTTGCAGT TCTGTTCGAT
ACCGTCGTGA CGTCGAGTGA TGTACCGCAG GGCAGGGGTA AGCCCGAGCC TGACATCTTC
TTGCTGGTAG CCCAGCAACT CGATGCCGAG CCGGCGGACT GTCTGGTGTA TGACGACACC
GACGTGGGCG TAGCGGCGGC GCTTTCGGCG GGCATGGCGG CGTACAACGT ACAGACCGGT
GTCCTCAGCG CGCCGATCGG CGCGGCTCCG AGGCATCGGC CTGCGGTCAT GGATCGGGTC
GACTAG
 
Protein sequence
MTTRAAVPDG ETFGALIFDW DGTLVDSNDV CFTALARAMA DAGAKLDPDW YWPRQAITSP 
DMLLAWEQEF GHLPEPVDDI IRRCRGYVRA AAPNLRVIDD VALVARTARQ RGQRLGIGSN
SSGSVVAAGL EATGLAVLFD TVVTSSDVPQ GRGKPEPDIF LLVAQQLDAE PADCLVYDDT
DVGVAAALSA GMAAYNVQTG VLSAPIGAAP RHRPAVMDRV D