| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4781 |
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| Symbol | |
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| ID | 5704448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5412071 |
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| End bp | 5414182 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641274179 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001539525 |
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| Protein GI | 159040272 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000215564 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAAT CGATCGGTCC AACCACCCGG CACGCCTCGT CGGCCGGCAG CCGACCCCTG
CTGGAACTGC GCGACCTCGA CACCGACATC GCGCTACGCC GCGGCACGGT ACACGCCCTC
GACGGCGTCA GTCTCGAGGT CGCGCCCGGG CAGACCCTCG GCATCGTCGG CGAATCCGGC
AGCGGCAAGA CGATGACCGC CCTGTCGATC ATGGGTCTAC TTCCGTCCGG CGGTCGGGTC
GCCGGTGGGC AGATTTTGTT CGAGGGACGG GACCTGCGAT CGTTGCCACC CGACGAGGTG
CGCCGAATCC GAGGTGTTCG GATGGGCATG GTCTTCCAGG ACCCGCTCAC CTCGCTCAAC
CCCACCATGC GCATCGGCGC GCAGGTGGCC GAACCGTTGC GCGTGCACGA GCGGGTCGGC
CGGGCGGAGG CCCGGGAGCG GGCCGTCGAG ATTCTGCGCC GGGTCGGGAT GCCGCGTCCG
GAGCGGATCG TCGACAGCTA TCCGCATGAG CTGTCCGGCG GAATGCGGCA ACGGGTCGCC
ATCGCGATGG CACTGGTCTG CTCACCAAGC CTGCTCATCG CCGACGAACC GACCACGGCC
CTCGACGTCA CCACCCAGCG GCAGATCCTC GAACTCATCG ACGATCTGCG AGAAGAGTTC
GGGATGGCCG TCATCCTGGT CACCCACGAT CTCGGGGTAA TCGCCGGTCG GGCGGACCGG
GTCGCCGTCA TGTACGCCGG ACGGGTCGTG GAGACCGCGG CCACCGAGCA GTTGTTCCAC
GCGCCCCGAC ACCGCTACAC CGAGGCCCTG ATGCAGGCGC TACCCGAGTC GGCGATCCGG
GAGAACGGCG GACACGACCG GCTGAACAGC ATCCCAGGGC TGCCGCCGGA CCTGTCCGGC
CCCCTGACGG GCTGCCGGTT CGCGCCGCGG TGTTCGTATG TCGGTGACGA CTGCCGGACC
ACCGACCCGT CCCTGATCCC GGGCGCGCAC CAGCACGCGT GCCTGCACCC GGTACCCGCG
CCCACCGGGG CGGTCACCGG GCCGGTCCCC GCGCGGACCG AACCGGCGGC GACGCCGGTC
ACCGCGGCAC CCGAACTCGC GGCGGCGCCG GTCCTGTCGG TGCGGAACCT GGTCAAGAAC
TACCCGGCGC ACGGAGGTGG GCTACTGCGC CGCAGCGCCG GGCAGGTAAG CGCGGTGGCC
GACGTCTCCT TCGAGGTCAG GCCCGGGGAG ACCTTCGGGC TCGTCGGCGA GTCCGGCTGC
GGTAAGTCCA CTGTGGGACG ACTCTCCGTC GGCCTGGAAC AGCCCTCCGC CGGACAGATC
GTGTTGGACG GTACGGATCT CACCGACCTG ACCGGTCGGG AACGACGCCG AATGCACCGG
CAGGTCCAAC TCATGTTCCA GGACAGCTAC GCCGCGATGA ACCCTCGGAT GCGCGTCGAC
GCCATCCTCG CCGAACCGCT CGAGATTCAG AAGGTGGGTG ACGGTGCGGC ACGGCAAGCG
CGGATCGCCA CCCTCCTCGA CCAGGTGGGG TTGTCCCGGC GGGCGCTGGA ACGCTACCCC
CACGAGTTCT CCGGCGGTCA GTTGCAGCGG ATCGGGCTGG CCCGGTCGCT GGCGCTGCGC
CCCCGCCTGA TCGTCGGCGA CGAACCGGTG AGCGCACTGG ACGTGTCGAT CCAGGCCCAG
GTACTCAACC TGATGCGGGA CCTGCAGCGC GAGCTCGGTC TGGCGTACAT CTTCATCAGC
CATGACCTGT CCGTTGTCGA CTACATGGCG GATCGGATCG GGGTCATGTA CCTCGGCAAG
CTCGTCGAGA TCGGGCCCGC CCGGGACGTG GTGCGAGCCG CCCGGCATCC GTACACGCAG
GCCCTGGTCG ACGCGGTCCC GTCCATCACG CCGAGCTCGG CAGCCGCTGG CGACGGCATG
ACCATCCGGG GCGAGCTTCC CAGTGCCCTC GACCCACCCA CCGGATGCCG ATTCCGTACC
CGCTGCCCCC GCGCGGCGCA GATCTGCACG ACGGAGCCGC CGCTGGTCGG TGGCCTGCAC
CAGGTGGCCT GCCACCTGCC GCTACGCGCG GAGCCAAGCG GGACGGCCAC GCAGACCCAG
GCCGCTGTAT GA
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| Protein sequence | MSESIGPTTR HASSAGSRPL LELRDLDTDI ALRRGTVHAL DGVSLEVAPG QTLGIVGESG
SGKTMTALSI MGLLPSGGRV AGGQILFEGR DLRSLPPDEV RRIRGVRMGM VFQDPLTSLN
PTMRIGAQVA EPLRVHERVG RAEARERAVE ILRRVGMPRP ERIVDSYPHE LSGGMRQRVA
IAMALVCSPS LLIADEPTTA LDVTTQRQIL ELIDDLREEF GMAVILVTHD LGVIAGRADR
VAVMYAGRVV ETAATEQLFH APRHRYTEAL MQALPESAIR ENGGHDRLNS IPGLPPDLSG
PLTGCRFAPR CSYVGDDCRT TDPSLIPGAH QHACLHPVPA PTGAVTGPVP ARTEPAATPV
TAAPELAAAP VLSVRNLVKN YPAHGGGLLR RSAGQVSAVA DVSFEVRPGE TFGLVGESGC
GKSTVGRLSV GLEQPSAGQI VLDGTDLTDL TGRERRRMHR QVQLMFQDSY AAMNPRMRVD
AILAEPLEIQ KVGDGAARQA RIATLLDQVG LSRRALERYP HEFSGGQLQR IGLARSLALR
PRLIVGDEPV SALDVSIQAQ VLNLMRDLQR ELGLAYIFIS HDLSVVDYMA DRIGVMYLGK
LVEIGPARDV VRAARHPYTQ ALVDAVPSIT PSSAAAGDGM TIRGELPSAL DPPTGCRFRT
RCPRAAQICT TEPPLVGGLH QVACHLPLRA EPSGTATQTQ AAV
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