| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4780 |
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| Symbol | |
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| ID | 5704447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5411156 |
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| End bp | 5412058 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641274178 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001539524 |
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| Protein GI | 159040271 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.684387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000235996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAGCACGC TGTCCGAGGC GGTCGGCCCG GCCGAGCCGA AGGACGCGCC ACCGCGCGGC
CTGTGGCGGC AGGGGCTGAT CGTCTTCTGC GAGAACCGGC TTGCCCTGGT GGGGCTGTGT
CTGTTCGTCC TCCTGGCCGG GGTCTGTTTC CTCGGACCGT TGGTGTACCA GACCGACCAG
GTACACACGG ACCTCACCGC CGTACACCTG GCCCCGGGAG AGCAGGGACA TCCACTCGGC
ACCGACGGGG TCGGCTACGA CCAGTTGGGG CGGTTGATGC TCGGCGGCCA GACCTCCATC
ATCGTCGGAC TGGCTGCCGG GATCCTCGCC ACCATCGTTG GCACGCTTCT GGGCGCCATC
GCCGGCTTCG TCGGCGGCTG GGTGGACGCC GCGGTGATGC GCGTCGTCGA CGCGATGATG
TCGATCCCGT CGTTGTTCCT GTTCATGCTG CTCGCCGCCA TCGTCACACC GAGCGTGCCG
ATGCTCATCC TCATCATCGG CGCCTTCGCC TGGTTGGGTC CGGCCCGGCT CGTGCGAGGC
GAGGCACTGA CGCTGCGCTC ACGCGAGTAC GTCCAGGCGA TGCGCGGGAT GGGTGGCACG
GGCGGTCGTG CGGTCCGTCG ACACATCATC CCCAACGCCA TCGGCACGGT GATCGTCAAC
GCCACCTTCC AGGTCGCCGA CGCCATCCTC TACGTCGCCT ACCTGTCCTT CCTCGGCCTC
GGCGTCCCCC CACCGGCGGC GAACTGGGGT GGCATGCTCT CCGATGGTCT GGCGGACACC
TACAGCGGCC ACTGGTGGCT GTTGTACCCG CCCGGGATCG CCATCATCCT CATCGTCCTC
GCCTTCAACT TCATCGGTGA CGGGCTGAGG GATGCCTTCG AGGTTCGCCT CCGGCGACGC
TAG
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| Protein sequence | MSTLSEAVGP AEPKDAPPRG LWRQGLIVFC ENRLALVGLC LFVLLAGVCF LGPLVYQTDQ
VHTDLTAVHL APGEQGHPLG TDGVGYDQLG RLMLGGQTSI IVGLAAGILA TIVGTLLGAI
AGFVGGWVDA AVMRVVDAMM SIPSLFLFML LAAIVTPSVP MLILIIGAFA WLGPARLVRG
EALTLRSREY VQAMRGMGGT GGRAVRRHII PNAIGTVIVN ATFQVADAIL YVAYLSFLGL
GVPPPAANWG GMLSDGLADT YSGHWWLLYP PGIAIILIVL AFNFIGDGLR DAFEVRLRRR
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