| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4778 |
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| Symbol | |
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| ID | 5704445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5408324 |
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| End bp | 5410126 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641274176 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001539522 |
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| Protein GI | 159040269 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.584214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000356618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGAGCA GATTTCCCCG CCGCGCCCTG CGTGGCGCGG TGGCGGCAGC CACCACGATC
GCTCTCGGGG CGGGCCTGGT CGGCTGCGGT GACAGCAGTG GATCGTCCCA AGACGGCGGA
AGTCAGGGCA AGGACACCGT GACGGTCGCC TTGCGTACCC CCAACTGGAT CCTGCCGATC
TCGGCACCCG GATTCACGCA GGGTGAAAAC GCCATCTTCA ACCAGTCGCT CTACCGGCCC
CTGTACCAGT ACCGGCTCGA CGGCACGGCG CAGTACAACA TCGACCCACA ACGCTCGATG
GCCGAGCCAC CGCAGGTGAG CGAGGACGGT CGGACCCTGA CGATCACGCT GAAGGACAAC
ACCTGGTCCG ACGGCAAGCC CATCACCACC AAGGACATCC AGTTCTGGTA CGACCTGGTC
ACGGCGAACA AGGACAAGTG GGCGTCCTAC CGGGCCGGCG GCTTCCCCGA CAACGTCGCG
GAGTGGTCGG TCCAGGACGA GAAGACCTTC TCGATCACCA CCACGAAGGT CTACAACACC
GCGTGGTTCG TCGACAACCA ACTCAACCGC ATCACGCCCC TGCCCCAGCA CGCCTGGGAC
AAGGACTCCG CGACCGCCGA CGTGAGCGAC CTCGCCAGCA GCCCGGAGGG CGCCGAGAAG
GTCTTCGACT TCCTCACCGC CGCCGCGAAG GACCCCAAGA CGTACGACTC CAACGAGTTG
TGGAAGGTCA CCAGCGGCGC GTGGAAGCTG GAGAAGTACG TGCCCAACGG TGAGGTCACC
CTCGCCGCCC AACCGAACTA CTCCGGTACC GACAAACCGA AGCTGGCCAC GGTCGTGTTG
CGCCCGTTCA CCAGCGACGA CGCCGAGTTC AACGTGCTCC GCGCCGGTGA CATCGACTAC
GGGTACGTGC CAGCGGCCAA CCTGTCCCAG GAGAGCTACC TCGAGTCCAA GGGATACACG
GTCTCGCCGT GGTACGGCTG GTCGATCACC TACCTGCAGC TGAACTACAA CAACCCGAAA
ACCGGCGTGC TGTTCAAGCA GCCCTACCTT CGGCAGTCGC TGCAGATGCT CATCGACCAG
CCGACGATCA GCAAGGTCAT CTGGTCGGAC ACCGCCGCGC CGACCTGCGG CCCGGTACCG
GCCAAGCCCG GCACCAACAC CGACGCCGCC GGATGCGCCT ACTCCTTCGA CCCGGCGAAG
GCCAAGGAAC TGCTGGAGAG CCACGGCTGG AAGGTGACCC CGGACGGGCA GACCACCTGC
CAGTCACCGG GCACCGGCCC GAACCAGTGC GGTGACGGAA TCGCCGCCGG CACGGCGCTG
GAGTTCACCG TCACCAGCCA GACCGGGTTC GCCGCCACGA CCAAGATGTT CGCCGAGATC
AAGTCACAGA TGGCCAAGCT CGGCATCCAG CTGACGATCA AGGAGGTGCC GGACTCGGTC
GCGGTCACCC CGGCGTGCGA GCCGACCGAG GGGACCTGCG ACTGGGACAT GTCCTTCTTC
GGCTCGCAGG GCAGCTGGTA CTACCCGGCC TTCGCCAGCG GCGAGCGGCT CTTCGCCACC
GACGCCCCGG TCAACCTGGG CAGCTACAGC AATCCGGAGG CCGACAAGCT CATCGAGGCC
ACCCAGTTCG CTGGCGACGA GAGCGCGCTC ACGGCGTACA ACGACTTCCT GGCCAAGGAC
CTGCCTGTGC TGTGGATGCC GAACCCGGTG TACCAGGTCT CGGCGTACCG CTCCGGCCTG
CAGGGAGTCG AGCCGCAGGA TCCGATGAAT CTCATGTACT TCCAGGACTG GTCCTGGAAG
TAA
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| Protein sequence | MTSRFPRRAL RGAVAAATTI ALGAGLVGCG DSSGSSQDGG SQGKDTVTVA LRTPNWILPI
SAPGFTQGEN AIFNQSLYRP LYQYRLDGTA QYNIDPQRSM AEPPQVSEDG RTLTITLKDN
TWSDGKPITT KDIQFWYDLV TANKDKWASY RAGGFPDNVA EWSVQDEKTF SITTTKVYNT
AWFVDNQLNR ITPLPQHAWD KDSATADVSD LASSPEGAEK VFDFLTAAAK DPKTYDSNEL
WKVTSGAWKL EKYVPNGEVT LAAQPNYSGT DKPKLATVVL RPFTSDDAEF NVLRAGDIDY
GYVPAANLSQ ESYLESKGYT VSPWYGWSIT YLQLNYNNPK TGVLFKQPYL RQSLQMLIDQ
PTISKVIWSD TAAPTCGPVP AKPGTNTDAA GCAYSFDPAK AKELLESHGW KVTPDGQTTC
QSPGTGPNQC GDGIAAGTAL EFTVTSQTGF AATTKMFAEI KSQMAKLGIQ LTIKEVPDSV
AVTPACEPTE GTCDWDMSFF GSQGSWYYPA FASGERLFAT DAPVNLGSYS NPEADKLIEA
TQFAGDESAL TAYNDFLAKD LPVLWMPNPV YQVSAYRSGL QGVEPQDPMN LMYFQDWSWK
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