| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4776 |
|---|
| Symbol | |
|---|
| ID | 5704443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5405405 |
|---|
| End bp | 5406874 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641274174 |
|---|
| Product | MlrC domain-containing protein |
|---|
| Protein accession | YP_001539520 |
|---|
| Protein GI | 159040267 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5476] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.76631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00013029 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCCTCGCC CCCTCCGCGT CGCCATCGGC GGCATCCACA TCGAATCAAG CACATTCTCA
CCCCACCTGA GCACCGCCGA CGACTTCGAG GTCACCCGGG AGGAGGCGTT GCTCGCGCGA
TACGCCTGGC TCTCGCCCAC CCAGCCGTGG GCCGCTGACG TCGAATGGAT ACCACTCGTG
CACGCCCGGG CCCTTCCCGG CGGTGCCGTG GACGCCGAGA CGTACGCGCA ATGGGCCGCG
GAGATCGTGG AGAAGCTCGC CGCAGCCGGC CCACTGGACG GCGTCCTGCT GGACATTCAC
GGTGCGATGA GCGTGGTCGG CCGGTCCGAC GCAGAGGGCG ACCTGGTCAC CGCCATCCGG
TCGGTGATCG GTCCCGAGCC GTACATCTCG GCGGCGATGG ATCTGCACGG CAACGTCTCA
CCGGTGCTCT TCGACGCCTG CGACCTGCTC ACCTGCTACC GCACCGCCCC ACACGTCGAC
GTGTGGGAAA CCCGGGAGCG TGCCGCACGC AACCTCATCG AGGCGTTACG CCGTGAGCGA
CGTCCGCACA AGGCGCTGGT CCACGTGCCG ATCCTGTTGC CCGGCGAGAT GACCAGCACC
CGCGAGGAAC CGGCCCGGGG ACTCTACGCA CGGATCCCCG AGATCGAGGG CCGTGCCGGT
GTGGTCGACG CCGCGATCTG GATCGGGTTC GCCTGGGCCG ACCAGCCACG CTGTCAGGGC
GCGGTCGTCG TCACCGGCAC CGACGCCACC GTCACCGCCG AGGCGGCCCG CGAACTCGGC
GGGCATTTCT GGGCGGCCCG GGACGAGTTC ACCTTCGTCG CTCCCACCGG CTCGATGGAC
GAGTGCCTCG ACACCGCCCT GGCCGCCGTC GCCGATCAGG CGAAGCGGCC GTTCTTCATC
AGCGACTCCG GCGACAACCC GGGCGCCGGC GGCGCCGACG ACGTCACCTT CGCCCTCGAC
CGGATGTTGG CCCGCCCCGA GATCCGCGAC GGCTCGCGTC GGGCCGTGTT CGCCTCGCTG
GTCGACCCGC AGGCGGTAGC GCTTGTCGCC GATCAGCCGG TCGGCTCTCC GGTCCGGGTG
TCGGTCGGCG GGCGGATCGA CTCCCGGCCC CCGGGCCCGG TGGAACTCGA CGGGATTTTG
GAAGCGGTCG CCGACGATCC CGACGGCGGG CGATGCGTCA GCGTACGGGT CGGCGGGCTC
AGCATCTTCG TCACGTCCCG CCGGATGCAG TACCGGCTAC TGGCGTCGTA TACCCGGCTG
GGGGTCAGGG TCGACGAGGT GGACGTGGTC GTGGTGAAGA TCGGCTATCT CGAGCCGGAA
CTGTTCGACG CCGCCGGAGA CTGGCTGCTC GCCCTGACTC CGGGTGGCGT CGACCAGGAC
CTTGCGCGGT TGCCGTACCA GAACGTGGTG CGACCGGTGT TTCCCCTGGA CCGTGACTTC
GCGGCGGACC TCGCCGTGGT TGTCGGATGA
|
|---|
| Protein sequence | MPRPLRVAIG GIHIESSTFS PHLSTADDFE VTREEALLAR YAWLSPTQPW AADVEWIPLV
HARALPGGAV DAETYAQWAA EIVEKLAAAG PLDGVLLDIH GAMSVVGRSD AEGDLVTAIR
SVIGPEPYIS AAMDLHGNVS PVLFDACDLL TCYRTAPHVD VWETRERAAR NLIEALRRER
RPHKALVHVP ILLPGEMTST REEPARGLYA RIPEIEGRAG VVDAAIWIGF AWADQPRCQG
AVVVTGTDAT VTAEAARELG GHFWAARDEF TFVAPTGSMD ECLDTALAAV ADQAKRPFFI
SDSGDNPGAG GADDVTFALD RMLARPEIRD GSRRAVFASL VDPQAVALVA DQPVGSPVRV
SVGGRIDSRP PGPVELDGIL EAVADDPDGG RCVSVRVGGL SIFVTSRRMQ YRLLASYTRL
GVRVDEVDVV VVKIGYLEPE LFDAAGDWLL ALTPGGVDQD LARLPYQNVV RPVFPLDRDF
AADLAVVVG
|
|---|
| |