Gene Sare_4756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4756 
Symbol 
ID5705347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5385246 
End bp5386424 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content70% 
IMG OID641274154 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_001539500 
Protein GI159040247 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00204971 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00219208 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCCGCCG TGGATCTCGT ACTGCTGTTA CTCATGCTCG TGTTCGCGAT CAGCGGATAC 
CGCCAGGGCT TCGTCACCGG TGTGCTGTCG TTCACGGGGT TCTTCCTCGG AGCGCTGGCT
GGTCTGCAGA TCGGTCCCCT GCTCGCGCAA CAGTTCCTCG ACGGCGGTAC CCGGGTGTTG
ATCTCACTGG TGACGGTCTT CGGGCTGGCG GTGATGGGGC AGGCGCTCGC CGGCTGGCTC
GGTTCCCACC TGCGACGCAC GATCACCAGC GACGTCGGGC GACAGGCCGA CGACATCGGC
GGCGCATTCG TTTCACTGAC CGCCGTGCTT CTGGTCGCCT GGCTGGTCGC AGTCCCCCTG
GGCTCGTCGT CCCTGCCCTG GCTGGCCGCC GCGGTCCGCA ACAGCGCGCT GCTCACCGTG
GTGGACCGGG TGCTGCCCGA CCAGGCGCAG GAGTTGTCCA ACGCGCTGCG GGAGACCGTC
GACACCAACG GCTTCCCGGA CGTCTTCGGT GACCTGGCAC CCACCCGTGC CCGGCAGGTC
GCTCCACCCG ACCCGGCCCT CGCCGGCTCA CAGGTGGTGG CCGACAGCCG ACGCGCGGTG
GTCAAGGTGC TCGGCTCCGC CCCGGACTGC TCCCGTCGCA TCGAGGGCTC CGGCTTCGTC
TACGCCGACG ACCGGGTGAT GACCAACGCG CACGTGGTGG CCGGAACCCG CTCCACCGTC
GTCGAACTGA ACGGCGATCG GTACGACGCT CGAGTGGTGG TGTACGACCC GGACCGGGAC
CTGGCGGTCC TGTACGTTCC CGGCTTGCCC GGCCCGTCCA TGCGCTTCGC CGCCGGCAAT
GCGAGTAGCG GCACCGACGC GATCGTGCTC GGCTTCCCGC TCGACGGCCC GTACAACGCG
CAGTCGGCGC GGGTCCGGGA TGTCGACCAG ATCACCGGGC CCGACATCTA CTCCAGCGGG
AACGTGACCC GTGAGGTGTA CACCATCCGG GCCCTGGTGC AGAGCGGCAA CTCCGGCGGC
CCGCTGGTGT CGACGAACGG CCTGGTACTC GGGGTGATCT TCGCGGCGGC GGCCGACGAC
CCGAACACCG GCTTCGCGGT GACCGCAGCC GAGGCCCGCC CGGTCGCCCT GGCCGGAGCC
GCACGCATCC GCGGCGTCGG CACCGGCGAG TGCACCTGA
 
Protein sequence
MSAVDLVLLL LMLVFAISGY RQGFVTGVLS FTGFFLGALA GLQIGPLLAQ QFLDGGTRVL 
ISLVTVFGLA VMGQALAGWL GSHLRRTITS DVGRQADDIG GAFVSLTAVL LVAWLVAVPL
GSSSLPWLAA AVRNSALLTV VDRVLPDQAQ ELSNALRETV DTNGFPDVFG DLAPTRARQV
APPDPALAGS QVVADSRRAV VKVLGSAPDC SRRIEGSGFV YADDRVMTNA HVVAGTRSTV
VELNGDRYDA RVVVYDPDRD LAVLYVPGLP GPSMRFAAGN ASSGTDAIVL GFPLDGPYNA
QSARVRDVDQ ITGPDIYSSG NVTREVYTIR ALVQSGNSGG PLVSTNGLVL GVIFAAAADD
PNTGFAVTAA EARPVALAGA ARIRGVGTGE CT