Gene Sare_4730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4730 
Symbol 
ID5706032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5353174 
End bp5353701 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content72% 
IMG OID641274128 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_001539474 
Protein GI159040221 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0945541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000227824 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGACCCGCG CCCTGCTCTC CCTCGGCAGT AACCTGGGTG ATCGTGCCGG CCACCTGCGG 
TCGGCGGTCG CGTCGTTGGG CGGGTCCGTG CTCCTGGTCT CCGGGGTCTA CGAGACACCA
CCCTGGGGCG ACAGCGACCA GCCCGCGTAC CTGAACGCCG TCGTGTTGGC CGAGGATCCC
GACGCGGAGC CGGAGGACTG GTTGGCGCGG GCCCGGGCGG CCGAGCGCGC GGCCGGGCGG
GAACGCGACC CTGCCCGGCG CTTTGGTCCG CGCACCCTCG ACGTCGACGT CATCGTGGTG
TGGACCCAGG AGGGCACGCC GATGCTCCGT GACGATCCCG AGTTGACGCT GCCGCACCCG
CGTGCCCACC TACGTGCCTT CGTCCTGCGG CCCTGGCTCG ACATCCAACC GTACGGGCGC
CTACCGGGGC ACGGCTGGGT GACCGACCTG CTGAACTCGG CGGCGGTCGG CGCGGACGCG
TTGGAACTGC GTCCCTGCCC CGAAGTGGGG TTAGAGTCGA CGCTATGA
 
Protein sequence
MTRALLSLGS NLGDRAGHLR SAVASLGGSV LLVSGVYETP PWGDSDQPAY LNAVVLAEDP 
DAEPEDWLAR ARAAERAAGR ERDPARRFGP RTLDVDVIVV WTQEGTPMLR DDPELTLPHP
RAHLRAFVLR PWLDIQPYGR LPGHGWVTDL LNSAAVGADA LELRPCPEVG LESTL