| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4723 |
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| Symbol | |
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| ID | 5706025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 5347259 |
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| End bp | 5348395 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641274121 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001539467 |
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| Protein GI | 159040214 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000278675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGAAGT CCGGCCCCAG TTTGTCGTAC CCGCCTGGAG GATGTTGGGG TAGAAGACGC
GGGCGACCCG ACCGCCCGTC GGACACGCGG CCGGCCCGAA AGGCCGTGCC GGGACACGGA
AGGCGGGCAG ACATGCACGC GCGCACACGT TTGGCGATCG GTGCCGTCGG CGCCCTGGCC
ACGGCTGGGC TGTTGACTGG CTGCGGCGAG GCCGGGTCGT CGGGCACGGA CGCACCCGAG
CCGGCTGCCT CCGGGCAGGG ATGTGCCCCG GTGGCCGGCG ACGAGCTGAT CGTGCTGACC
GACGACAAGT TGCTCCAGAA CAGCGACAAT GTCATCCCCG CGGTCAACGC CGACGTCGCG
TCACCGCAGC TCGTCGCCGC CCTGGACCGG GTCTCCGCGG CACTGGACAC ACCGAAGCTG
ATTCAGCTCA ACAAGGCTGT CGACGTGGAC CGCAAGACGC CGGCGGTCGC GGCGGCCGAG
TTCGCCGCCG CCAACGACCT CACCACCGGC GTCGAGAAGG GCTCCGGCGG CACGATCACG
GTTGGTGCCG CCAACTTCAG TGAGAGCCAG ACCCTCGCCG AGCTTTACAA GATCGTGCTG
ATCGCCGCCG GCTATCAGGC CGAGGTGCAG CAGGTCGGCA GCCGCGAACT CTACGAGCCC
GCCCTGGAGA AGGGCGAGAT CCAGGTGTTC CCTGAGTACG CGGCCACGAT GGCGGAGTTC
CTCAACACCA AGGCGAACGG CAAAGACGCC CCGCCGGTCT CCTCGCCGGA TCTGGACGAG
ACGGTTGCCG CGCTGAAGGC GGCCGGTGCG AAGGTCAACC TGGCCTTCGG TTCGCCCTCC
GCGGCCCAGG ACCAGAATGC GTTTGCCGTT ACGCGTGCCT TCGCCGACAA GTACGACGTG
CGTACCCTCT CCGAACTGGC CGAGAAGTGC TCCGGTCAGG AGACCGTCCT GGCCGGTCCC
CCGGAGTGCC CGCAGCGGCC GAAGTGCCAG GTCGGGCTGG TCGAGGTCTA CGACTTCAAG
GCCGGGTCGT TCAGCTCGCT CGACGCTGCC GGGCCGCAGA CGAAGAATGC CCTGAAGACC
GGTGTGGCCA GCGTGGGTCT GGTGCTCTCC TCCGACGGGG CGCTCGCCGC CGGCTGA
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| Protein sequence | MTKSGPSLSY PPGGCWGRRR GRPDRPSDTR PARKAVPGHG RRADMHARTR LAIGAVGALA
TAGLLTGCGE AGSSGTDAPE PAASGQGCAP VAGDELIVLT DDKLLQNSDN VIPAVNADVA
SPQLVAALDR VSAALDTPKL IQLNKAVDVD RKTPAVAAAE FAAANDLTTG VEKGSGGTIT
VGAANFSESQ TLAELYKIVL IAAGYQAEVQ QVGSRELYEP ALEKGEIQVF PEYAATMAEF
LNTKANGKDA PPVSSPDLDE TVAALKAAGA KVNLAFGSPS AAQDQNAFAV TRAFADKYDV
RTLSELAEKC SGQETVLAGP PECPQRPKCQ VGLVEVYDFK AGSFSSLDAA GPQTKNALKT
GVASVGLVLS SDGALAAG
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