| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4715 |
|---|
| Symbol | |
|---|
| ID | 5707224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5337943 |
|---|
| End bp | 5339661 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641274113 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_001539459 |
|---|
| Protein GI | 159040206 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.232267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00072705 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTAC CGACCGGCGA CCAGCCGGCC CTGCCCCGCC TGCTGGCCGC GCCCGCGCCC
GGGTGGGTGG AGACGACCGA TGTGGTCGTC GTCGGCTCCG GTGTCGCCGG GCTGACCGCC
GCTCTCCATC TGCGCGAGGC GGGTCTGCAC GTCACGGTGG TAACCAAGGT CGACATCGAG
GAGGGCTCCA CGCGCTGGGC GCAGGGCGGT ATCGCTGCGG TGCTCGATCC ACACGACACT
CCGGCGGCGC ACGCCTCGGA CACCGAGATC GCCGGGGTCG GCCTCAGCGA TCCGGCGGCG
GTCCGTGTCC TCGTTGAGGA GGGGCCCACC CGGCTGCGGG AGTTGATGCG AATCGGCGCG
GAGTTCGATC GCAACGCGGA CGGCTCGCTC ATGCTCACCC GGGAGGGCGG GCACCGGGCG
CACCGCATCG TGCACGCGGG TGGCGATGCC ACCGGGGTGG AGGTGCAACG GGCGCTGCAC
GCTGCCGTAC GGCGGGATCC GTGGATCCGG CTCGTCGAGC ACGCCCTGGT GCTGGACCTG
CTTCGGGCAC CCGGCAACGG TCCGGATGGC CTCGGCCCGG CCTGCGGCGT GACCCTGCAC
GTGCTCGGTG AGGGCAGCGA GGACGGCGTC GGGGCGATCC TGGCCCGTGC GGTGGTGCTC
GCGACCGGGG GACTGGGCCA GGTCTTCGCG GTCACCACCA ACCCTGCGGT CTCCACCGGA
GACGGGATGG CCGTCGCGCT GCGGGCCGGC GCTGCCGTGA CCGACGTGGA GTTCGTCCAG
TTTCATCCGA CCGCGCTGAT CGTCCCGGCC TCTGGCCGGG TGCCCCAGGC CGGGCACGCC
CAGCAGCCGC TGGTTTCCGA GGCGCTGCGG GGTGAGGGAG CCCACCTGGT GGACTCCGAC
GGTAAGCGGT TCATGGTCGG GCAGCACGAG CTGGCTGAAC TGGCCCCACG GGATGTGGTC
GCGAAGGCGA TCCACCGGGT GTTGCTGGCC ACCGGCTCGG ACCATGTCTT TCTCGACGCC
CGTCACCTCG GCCGGGACTT CCTTGCCCGA CGGTTCCCCA CCATCGTGGC GTCCTGCCTG
GCCGTTGGCG TCGATCCGGC GGCCGATCTG ATCCCGGTGG CCCCCGCGGC GCACTACGCC
TCCGGCGGCG TCCGCACCGA CCTGCACGGC CGTACGTCCA TTCCCGGCCT GTACGCCTGC
GGCGAGGTCG CCTGCACCGG TGTGCACGGT GCGAACCGGC TTGCCAGCAA CTCGTTGCTG
GAGGGGCTCG TGTTCTCTCG CCGGATCGCC GAGGACCTGG CGACCGGCCT GCCGGAGCAG
TCGCGGCCGG CCCCGACCGG TGCCTGGGTG GGGGGTACGG GTCGGGTGCT GCCCGTCGTC
GACGTTCCGG CCCTGCAGCA GGCGATGACG CGGGGTGCCG GTGTGCTGCG GTCAGCGGCG
ACGCTGGCGG ACACGACGGC TGCCCTGGTC GCGCTCGGTG CGGGTCGGGG CGTGCCCCGT
ACGGCGGACT GGGAGGCGAC GAATCTGTTC ACCGTGGCGA CGGTGTTGGT CGCTGCCGCA
GCGGTGCGGC AGGAGACCCG GGGCTGCCAC TGGCGGGACG ACTTTCCGGT GGCCGACGAG
CGGTGGCGAG GTCACGTGAT CGGTGCCATC GACCGGCAGG GCCGGCTGAC GCGAACGTGG
CAGGGACGTG GGGTAGCTGG GGGCGGGGAG GCAACGTGA
|
|---|
| Protein sequence | MDLPTGDQPA LPRLLAAPAP GWVETTDVVV VGSGVAGLTA ALHLREAGLH VTVVTKVDIE
EGSTRWAQGG IAAVLDPHDT PAAHASDTEI AGVGLSDPAA VRVLVEEGPT RLRELMRIGA
EFDRNADGSL MLTREGGHRA HRIVHAGGDA TGVEVQRALH AAVRRDPWIR LVEHALVLDL
LRAPGNGPDG LGPACGVTLH VLGEGSEDGV GAILARAVVL ATGGLGQVFA VTTNPAVSTG
DGMAVALRAG AAVTDVEFVQ FHPTALIVPA SGRVPQAGHA QQPLVSEALR GEGAHLVDSD
GKRFMVGQHE LAELAPRDVV AKAIHRVLLA TGSDHVFLDA RHLGRDFLAR RFPTIVASCL
AVGVDPAADL IPVAPAAHYA SGGVRTDLHG RTSIPGLYAC GEVACTGVHG ANRLASNSLL
EGLVFSRRIA EDLATGLPEQ SRPAPTGAWV GGTGRVLPVV DVPALQQAMT RGAGVLRSAA
TLADTTAALV ALGAGRGVPR TADWEATNLF TVATVLVAAA AVRQETRGCH WRDDFPVADE
RWRGHVIGAI DRQGRLTRTW QGRGVAGGGE AT
|
|---|
| |