| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4709 |
|---|
| Symbol | |
|---|
| ID | 5707218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5330926 |
|---|
| End bp | 5333460 |
|---|
| Gene Length | 2535 bp |
|---|
| Protein Length | 844 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641274107 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001539453 |
|---|
| Protein GI | 159040200 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0549246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0242772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAGC GGTTCACCGA CCGAGCGCGT CGGGTTGTCG TCCTGGCTCA GGAAGAGGCC
CGGATGCTCA ACCATAATTA TATTGGTACT GAGCATATTT TGTTGGGCCT GATCCATGAG
GGTGAGGGTG TGGCGGCGAA GGCTTTGGAG AGTTTGGGGA TCTCTCTGGA GGGTGTGCGT
CAGCAGGTTG AGGAGATTAT CGGGCAGGGG CAGCAGGCGC CGAGTGGGCA TATTCCGTTT
ACTCCGCGGG CGAAGAAGGT GTTGGAGCTG TCGCTGCGGG AGGCGTTGCA GCTCGGGCAT
AACTATATTG GTACTGAGCA TATTTTGTTG GGTCTGATCC GTGAGGGTGA GGGTGTCGCG
GCTCAGGTGT TGGTGAAGTT GGGGGCGGAT CTGAATCGGG TTCGTCAGCA GGTGATCCAG
TTGTTGTCGG GGTATCAGGG TAAGGAGCCG GCGGCGGCGG GGACGGCGCC GGGTGAGGCG
GCTCCGTCGA CGAGTCTGGT GTTGGACCAG TTCGGTCGTA ATCTGACGCA GGCGGCGCGT
GAGGGCAAGC TTGATCCGGT GATCGGTCGG GAGAAAGAGA TCGAGCGGGT CATGCAGGTG
TTGTCCCGGC GGACGAAGAA CAATCCGGTG TTGATTGGTG AGCCGGGTGT GGGTAAGACG
GCGGTGGTGG AGGGCCTGTC GCAGCGGATC GTCAAGGGTG AGGTGCCTGA GACGTTGAAG
GACAAGCAGT TGTATACGCT TGATCTGGGC GCGTTGGTGG CGGGTTCGCG GTATCGGGGT
GATTTCGAGG AGCGGTTGAA GAAGGTCCTC AAGGAGATCC GTACCCGCGG TGACATCATT
TTGTTCATTG ATGAGATCCA CACGTTGGTG GGTGCGGGTG CCGCTGAGGG CGCGATCGAC
GCGGCGAGTA TTCTGAAGCC GATGTTGGCG CGGGGTGAGT TGCAGACCAT CGGCGCGACG
ACGTTGGATG AGTATCGTAA GCATCTGGAA AAAGACGCCG CGTTGGAGCG CCGGTTCCAG
CCTATTCAGG TGGGTGAGCC GTCACTGGCG CACACCATCG AGATCCTGAA GGGTCTGCGG
GACCGGTACG AGGCGCATCA CCGGGTGTCG ATCACGGACG CGGCGTTGGT GGCGGCGGCG
ACGTTGGCCG ACCGGTACAT CTCGGATCGG TTCCTGCCGG ACAAGGCGAT CGACCTGATC
GACGAGGCGG GCGCGCGGAT GCGGATCCGG CGGATGACCG CGCCGCCGGA CCTGCGGGAC
TTCGACGAGC GGATCGCGCA GGTGCGTCGG GACAAGGAAT CCGCGATCGA CGCGCAGGAC
TTCGAACGGG CCGCGCAGCT GCGCGACACC GAGAAGCAGC TGTTGGGTCA GAAGGCCCAG
CGGGAGAAGG AGTGGAAGGC CGGTGACCTG GACGTGGTCA CCGAGGTCGA CGACGAGCAG
ATCGCCGAGG TCCTCGGGAA CTGGACGGGG ATCCCGGTGT ACAAGCTGAC CGAGGAGGAG
ACCTCCCGGC TGCTGCGGAT GGAAGACGAA CTCCACAAGC GGGTCATCGG GCAGGAAGAC
GCGGTCAAGG CGGTGTCGAA GGCGATCCGC CGGACCAGGG CCGGTCTGAA GGACCCGAAA
CGGCCCTCCG GGTCGTTCAT CTTCGCCGGC CCGTCCGGAG TCGGTAAGAC CGAACTGTCC
AAAGCCCTCG CGGAGTTCCT GTTCGGCAGC GAGGACGCCC TGATCCAGCT GGACATGTCC
GAGTTCCACG ACCGGTACAC GGTGTCGCGG CTTGTGGGTG CCCCTCCCGG CTACGTCGGC
TACGACGAGG GCGGGCAACT GACCGAGAAG GTCCGCCGTA GGCCGTTTAG CGTGGTCCTG
TTCGACGAGA TCGAAAAGGC CCACCCGGAC GTGTTCAACA CGCTGCTGCA GATCCTCGAG
GACGGCCGTC TCACCGACGG TCAGGGCCGG ATCGTGGACT TCAAGAACAC GGTCATCATC
CTGACCACGA ACCTCGGTAC CCGCGACGTC GCCAAAGCCG TGTCGCTGGG CTTCCAGGCA
TCCGACGACT CCGACTCCAA CTACGACCGG ATGAAGCAGA AGGTCAACGA CGAACTCAAA
CAGCACTTCC GGCCCGAGTT CCTCAACCGT ATCGATGACA CGATCGTGTT CCACCAGCTA
CGCCACCAGG AAATCCTCTC GATCGTCGAC ATCATGATCG GCCGGATCGA AACCCAACTC
CGGAACAAGG ACATGGGCCT CGAACTCACC GACAACGCCA AGAAATACCT CGCGACCAAG
GGCTTCGACC CCGTCCTCGG CGCCCGACCA CTACGCCGCA CCATCCAACG CGACATCGAG
GACAACCTCT CCGAACGGAT CCTGTTCAAC GAACTCACCC CCGGCCAGAT CATCGTCGTC
GACTGCGACG GCGACCCCAC CAACATCGAC ACCTCCACCC TCACCTTCCA CGGCACCGAC
AAACCGATCG ACGTGCCGGA CGCGGTACCA GCCGACCTCG GCGGTGCTGC CACGGGAGCG
GACGACACGG CGTAG
|
|---|
| Protein sequence | MFERFTDRAR RVVVLAQEEA RMLNHNYIGT EHILLGLIHE GEGVAAKALE SLGISLEGVR
QQVEEIIGQG QQAPSGHIPF TPRAKKVLEL SLREALQLGH NYIGTEHILL GLIREGEGVA
AQVLVKLGAD LNRVRQQVIQ LLSGYQGKEP AAAGTAPGEA APSTSLVLDQ FGRNLTQAAR
EGKLDPVIGR EKEIERVMQV LSRRTKNNPV LIGEPGVGKT AVVEGLSQRI VKGEVPETLK
DKQLYTLDLG ALVAGSRYRG DFEERLKKVL KEIRTRGDII LFIDEIHTLV GAGAAEGAID
AASILKPMLA RGELQTIGAT TLDEYRKHLE KDAALERRFQ PIQVGEPSLA HTIEILKGLR
DRYEAHHRVS ITDAALVAAA TLADRYISDR FLPDKAIDLI DEAGARMRIR RMTAPPDLRD
FDERIAQVRR DKESAIDAQD FERAAQLRDT EKQLLGQKAQ REKEWKAGDL DVVTEVDDEQ
IAEVLGNWTG IPVYKLTEEE TSRLLRMEDE LHKRVIGQED AVKAVSKAIR RTRAGLKDPK
RPSGSFIFAG PSGVGKTELS KALAEFLFGS EDALIQLDMS EFHDRYTVSR LVGAPPGYVG
YDEGGQLTEK VRRRPFSVVL FDEIEKAHPD VFNTLLQILE DGRLTDGQGR IVDFKNTVII
LTTNLGTRDV AKAVSLGFQA SDDSDSNYDR MKQKVNDELK QHFRPEFLNR IDDTIVFHQL
RHQEILSIVD IMIGRIETQL RNKDMGLELT DNAKKYLATK GFDPVLGARP LRRTIQRDIE
DNLSERILFN ELTPGQIIVV DCDGDPTNID TSTLTFHGTD KPIDVPDAVP ADLGGAATGA
DDTA
|
|---|
| |