Gene Sare_4691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4691 
Symbol 
ID5708151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5313120 
End bp5313815 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content75% 
IMG OID641274089 
Product2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 
Protein accessionYP_001539435 
Protein GI159040182 
COG category[I] Lipid transport and metabolism 
COG ID[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGC AGCTTGATCC GCGCGGTGAC GTCGCGGTCC TCGTGCCTGC GGCGGGTGCC 
GGCGTGCGGC TCGGCCCTGG CGGGCCGAAG GCGCTGCGGC TGCTCGGCGG TGAGCCGCTG
CTGGTGCACG CGGTTCGCCG GCTCGCCGCC GCCACGTCGG TGCACACCGT GGTGGTGGCC
GCTCCGGCGG CGGACGTGAT CGCGGTCCGC GAGCTACTGG CCCCGGTGGC GCCGGTCACC
GTGGTGCCGG GGGGAGCCGA ACGGCAGGCG TCGGTCGCCG CCGCGCTGGC CGCGGTCCCT
GTCGGCCCGG AGATCGTGCT GGTGCACGAC GCAGCCCGGG CGCTCACCCC GCCGGAGCTG
GTGGAGTCCG TCGCCGCGGC GGTCCGGTCC GGTCACGACG CGGTGATTCC GGTGCTGCCG
GTGGTCGACA CCGTCAAGGA GGTCGGTGCC GGCGAGCGTG TCCTCGGTAC GGTGGACCGC
TCTGCCCTTC GGGCCGTGCA GACGCCGCAG GGGTTTCGGC GGTCGGTGCT GAGCACCGCG
CACGCCGCTG CAACCGACCC GCTCACCGAC GATGCCGGCC TGGTCGAGAA GCTCGGCGTG
CCGGTGGTCT GCGTACCTGG TTCCGAGTAC GCACTGAAGA TCACCCGCCC GTTCGACCTG
GCGTTGGCCG AGCACCTGCT GACGGTCGGC GGCTGA
 
Protein sequence
MTAQLDPRGD VAVLVPAAGA GVRLGPGGPK ALRLLGGEPL LVHAVRRLAA ATSVHTVVVA 
APAADVIAVR ELLAPVAPVT VVPGGAERQA SVAAALAAVP VGPEIVLVHD AARALTPPEL
VESVAAAVRS GHDAVIPVLP VVDTVKEVGA GERVLGTVDR SALRAVQTPQ GFRRSVLSTA
HAAATDPLTD DAGLVEKLGV PVVCVPGSEY ALKITRPFDL ALAEHLLTVG G