| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4686 |
|---|
| Symbol | |
|---|
| ID | 5704313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5308187 |
|---|
| End bp | 5309383 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641274084 |
|---|
| Product | fumarylacetoacetase |
|---|
| Protein accession | YP_001539430 |
|---|
| Protein GI | 159040177 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.454046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.30172 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTGGG TGACCGGCCT CGAGGGCTCG CCGTACGGGG TGCACAACCT GCCGTACGGG
GTGTTCCGCA CCGCAGCCCG TGAGCCGCGG GTGGGCGTAC GCGTCGGTGC CCACGTGCTC
GACCTCGGCG GTGCGGAGCA GGCTGGTCTG GTGTTTGCTG CCGGCACGTT GGGCCGCCCC
CGGCTGAACG ACTTCATGGC GCTCGGTCGA CCGCAGTGGA CGGCGGTGCG GCAGCGGGTC
ACCGAGCTGC TCACCGACAG CGCCCACCGG GCAGCGGTCG AGCCGCTGCT CCTGCCGCTG
CTGGACGTCG AGCTGCTGCT TCCCTTCGAC GTGGCCGACT ACGTCGACTT CTACTCTTCC
GAGCAGCACG CCACCAACGT CGGCAAGATC TTCCGCCCCG GTCAGCCACC GCTGTTGCCC
AACTGGAAGC ACCTGCCGAT CGGCTACCAC GGCCGGGCCG GCACCGTCGT GGTCTCCGGC
ACCCCGATCG TCCGGCCGTG CGGCCAGCGG GCCACCCCGC AGGGCCCGGT CACCGGTGCC
TCCGTCCGCC TCGACATCGA GGCGGAGGTC GGCTTCGTGG TGGGAGTGCC CAGCCCGCTG
GGCCACCGCG CCGCAGCCGG CGACTTCGCC GACCACGTGT TCGGCGTGGT ACTGGTCAAC
GACTGGTCCG CCCGGGACAT CCAAGCGTGG GAGTACCAAC CTCTCGGCCC GTTCCTCGGT
AAGTCCTTTG CCACGTCGAT CGCCGCCTGG GTGACGCCGC TGGAGGCTCT TGGCGCGGCG
TTCGTACCAG CGCCGGACCA GGATCCGCCC GTCGCCGACT ATCTGCGCGA CGAGCCCCAC
CTCGGATTGG ACCTGCGTCT GTCGGTGGAG TGGAACGGTG AGCGGGTGAG CGAGCCACCG
TTCGCCGCGA TGTACTGGAC GCCGGCACAG CAACTAGCCC ACCTGACCAT CAACGGAGCC
GCGTTGCGCA CCGGTGACCT GTACGCCTCC GGCACCGTGT CCGGGGACGA GCGGCACCAG
GTCGGCTCGT TCCTCGAGCT GACCTGGGGC GGTACGGAGC CCGTGCGAGT TGGCGGCGAG
GAACGGATGT TCCTGGCGGA CGGCGACACC GTCACCATCT CTGGTACCGC GCCCGGACCG
GACGGTACGA CCGTCGGCCT CGGCGAGGTC ACCGGCACCA TCATCAGCCC CCGCTGA
|
|---|
| Protein sequence | MTWVTGLEGS PYGVHNLPYG VFRTAAREPR VGVRVGAHVL DLGGAEQAGL VFAAGTLGRP
RLNDFMALGR PQWTAVRQRV TELLTDSAHR AAVEPLLLPL LDVELLLPFD VADYVDFYSS
EQHATNVGKI FRPGQPPLLP NWKHLPIGYH GRAGTVVVSG TPIVRPCGQR ATPQGPVTGA
SVRLDIEAEV GFVVGVPSPL GHRAAAGDFA DHVFGVVLVN DWSARDIQAW EYQPLGPFLG
KSFATSIAAW VTPLEALGAA FVPAPDQDPP VADYLRDEPH LGLDLRLSVE WNGERVSEPP
FAAMYWTPAQ QLAHLTINGA ALRTGDLYAS GTVSGDERHQ VGSFLELTWG GTEPVRVGGE
ERMFLADGDT VTISGTAPGP DGTTVGLGEV TGTIISPR
|
|---|
| |