| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4680 |
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| Symbol | |
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| ID | 5704307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5302284 |
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| End bp | 5303489 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641274078 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001539424 |
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| Protein GI | 159040171 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.211865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.133112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAG CGATCGACCG ACCCCAGTCG AGCGACGAGG TCGACGCCGA CCTGCTGGTC
GGCGCCGTAG ACCACGACAT CAGCCGGGAT CCGTTCCCGG TCAGGGGCCT CGACCACGTG
CACTTCCTGG TGGGCAACGC CAAACAGGCC GCGCACTACT ACTCCACCGC GTTCGGCATG
ACGTGCGTGG CCTACCGGGG GCCGGAACAG GGCCACCGAG ACCACGCCCA GTACGTCCTG
ACCAGTGGCT CGGCCCGGTT CGTTCTCACC GGCACGGTCC GCCCCGACGC GGCGGGTGCC
GAGCAGGTCG CCCGGCACAG CGACGGCGTC TCCGACATCG CACTGGAGGT CCCGGACGTC
GACGCGGCGT ACGCGCACGC CATCGCCCAG GGCGCGAGCG GTCTGGCGGA GCCGTACGAC
GTCAGCGACG AACACGGCAC CGTCCGGCTG GCAGCCATCG CGACGTACGG CGACACCCGC
CACACCCTGG TCGACCGCTC CCGTTACCGC GGTCCGTTCC TGCCCGGCTA CGTCGCCCGG
CAGCCGATCG TCGATCGTCA GCCGATGGTC AACGCAGGTC TCCAGCCCAA GCGCTTCTTC
CAGGCGATCG ACCACATCGT CGGCAACGTC GAGCTGGGCC GCATGGACGA GTGGGTCGAG
TTCTACCGGC GTGTGATGGG CTTCACCAAC ATGGCGGAGT TCGTCGGCGA CGACATCGCC
ACCGACTATT CGGCGCTGAT GAGCAAGGTG GTCGCCAACG GCACCCGGAA GGTGAAGTTC
CCGCTCAACG AGCCGGCGGT CGCCCGGAAG AAGTCGCAGA TCGACGAGTA CCTGGAGTTC
TATCAGGGCC CGGGAGCCCA GCACATCGCG GTGGCCACCA ACGACATTCT GGCCAGCGTG
GACGCGATGC GCGCGGCCGG GGTCGAGTTC CTGGACACCC CGGACTCGTA CTACGACGAC
CCGGAACTAC GTGCCCGGAT CGGTGAGGTG CGGGTGCCGA TCGAGGAGCT GAAGGCCCGC
GGGATCCTGG TTGACCGGGA CGAGGACGGC TACCTGCTCC AGATCTTCAC CAAGCCGGTG
CAGGACCGCC CAACCGTCTT CTTCGAGCTG ATCGAGCGAC ACGGCTCACT CGGCTTCGGC
AAGGGCAACT TCAAGGCACT CTTCGAGGCC ATCGAACGGG AACAGGAGAA GCGCGGCAAC
CTGTGA
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| Protein sequence | MTQAIDRPQS SDEVDADLLV GAVDHDISRD PFPVRGLDHV HFLVGNAKQA AHYYSTAFGM
TCVAYRGPEQ GHRDHAQYVL TSGSARFVLT GTVRPDAAGA EQVARHSDGV SDIALEVPDV
DAAYAHAIAQ GASGLAEPYD VSDEHGTVRL AAIATYGDTR HTLVDRSRYR GPFLPGYVAR
QPIVDRQPMV NAGLQPKRFF QAIDHIVGNV ELGRMDEWVE FYRRVMGFTN MAEFVGDDIA
TDYSALMSKV VANGTRKVKF PLNEPAVARK KSQIDEYLEF YQGPGAQHIA VATNDILASV
DAMRAAGVEF LDTPDSYYDD PELRARIGEV RVPIEELKAR GILVDRDEDG YLLQIFTKPV
QDRPTVFFEL IERHGSLGFG KGNFKALFEA IEREQEKRGN L
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