Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4674 |
Symbol | fumC |
ID | 5704853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5294175 |
End bp | 5295575 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641274072 |
Product | fumarate hydratase |
Protein accession | YP_001539418 |
Protein GI | 159040165 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.780743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.186713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGAATC CAGACGCGAC CGGCTACCGG ATCGAACGTG ACTCGATGGG TGAGGTGGAG GTGCCCACCG AGGCGCTGTG GCGGGCGCAG ACCCAGCGCG CGGTGCAGAA CTTCCCGATC TCCGGGCGGG GGATAGAACC GGCCCAGATC CGGGCGTTGG CGCAGATCAA GGGAGCCGCG GCCGAGGTCA ACGGTGAACT GGGGGTGATC GATGCGAATG TGGCCGCCGC GATCGCCGCC GCCGCTGCGC ACGTGGCCGA CGGCGGGTAC GACGACCAGT TCCCGGTCGA CGTCTTCCAG ACCGGTTCCG GTACGTCGTC GAACATGAAC ACCAACGAGG TGATCGCCAC TCTGGCCAGT CGTGAGCTGG GCGCCGACGT GCACCCCAAC GACGATGTGA ACGCGTCGCA GTCGAGTAAC GACGTCTTCC CCTCCTCGAT TCACCTGGCC GCCACCGAGT TCGTGGCCCG CGATCTGCTC CCGTCCTTCG CGCACCTGGC CCAAGCGTTG GAGGCCAAGG CCGTCGAGTT CGAGACCGTG GTCAAGGCGG GGCGTACGCA TCTGATGGAC GCCACGCCCG TCACCCTGGG GCAGGAGTTC GGCGGGTATG CCGCGCAGGT CCGCTATGGC ATCGAGCGGC TGGAGTCGGC CCTGCCCCGG CTGGCTGAGC TGCCACTGGG CGGCACTGCC GTGGGTACCG GCATCAACAC GCCGCTGGGT TTCGCGGCGC GGGTGGTCGA GCGGCTGCGT GACTCGACCG GGCTGCCGCT GACCGAGGCA CGGAACCATT TCGAGGCGCA GAGTGCGCGG GACGCGCTGG TGGAGACCTC CGGGCAGTTG CGCACGGTCG CCGTCGGTCT GTACAAGATG GCCAACGACA TCCGCTGGAT GGGCTCCGGC CCCCGCGCCG GCCTGCGGGA GCTGCGTATC CCGGATCTCC AGCCCGGTTC GTCGATCATG CCCGGCAAGG TCAACCCGGT GGTGTGCGAG GCGGTGCGCC AGGTCTGTGC GCAGGTGATC GGCAACGACG CCGCGGTCAC CTTCGCTGGT TCCCAGGGCG ACTTCGAGCT GAACGTCATG CTCCCGGTCA TGGCCCGAAA CGTCCTGGAG TCGATCAAGC TGTTGGCCGC GTCGGGTCGG CTGTTGGCCG ACCGGTGCGT GGTCGGCCTG GTCGCGGACG CCGAGGTCTG TCTGGCGTAC GCGGAGGGTT CGCCGTCCAT CGTCACCCCG CTCAACCGTC ATCTCGGGTA CGACGAGGCC GCTTCGATCG CCAAGGAGGC CCTCGCGAAG CAGGTCTCGA TCCGGGAGGT GGTGGTCGCC CGGGGTCACC TGGACTCTGG CAGGCTGACC GAAACGCAGC TCGACGAGGC GCTCGACCTG CTTCGGATGA CACACCCCTG A
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Protein sequence | MTNPDATGYR IERDSMGEVE VPTEALWRAQ TQRAVQNFPI SGRGIEPAQI RALAQIKGAA AEVNGELGVI DANVAAAIAA AAAHVADGGY DDQFPVDVFQ TGSGTSSNMN TNEVIATLAS RELGADVHPN DDVNASQSSN DVFPSSIHLA ATEFVARDLL PSFAHLAQAL EAKAVEFETV VKAGRTHLMD ATPVTLGQEF GGYAAQVRYG IERLESALPR LAELPLGGTA VGTGINTPLG FAARVVERLR DSTGLPLTEA RNHFEAQSAR DALVETSGQL RTVAVGLYKM ANDIRWMGSG PRAGLRELRI PDLQPGSSIM PGKVNPVVCE AVRQVCAQVI GNDAAVTFAG SQGDFELNVM LPVMARNVLE SIKLLAASGR LLADRCVVGL VADAEVCLAY AEGSPSIVTP LNRHLGYDEA ASIAKEALAK QVSIREVVVA RGHLDSGRLT ETQLDEALDL LRMTHP
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